RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 DNAJB3Q8WWF6 145 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 SEPT8Q92599 483 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 RAD9AQ99638 391 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 CERS4Q9HA82 394 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 PRDM6Q9NQX0 595 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 EVPLQ92817 2033 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 TTC28Q96AY4 2481 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 ARID2Q68CP9 1835 aa14.02□□□□□ -0.16
SSSCA1-203ENST00000526877 KLRC4O43908 158 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 ZNF862O60290 1169 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 RHOBTB3O94955 611 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 OATP04181 439 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 RARRES1P49788 294 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 SLC26A2P50443 739 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 IGBP1P78318 339 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 HTRA4P83105 476 aaPredicted RBP14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 PRKCEQ02156 737 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 PSMD2Q13200 908 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 LPIN1Q14693 890 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 ARSHQ5FYA8 562 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 ZNF658Q5TYW1 1059 aaPredicted RBP14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 PADI6Q6TGC4 694 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 GAS2L3Q86XJ1 694 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 TRAPPC12Q8WVT3 735 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 TOP1MTQ969P6 601 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 DNAJC19Q96DA6 116 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 FAM167AQ96KS9 214 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 ZBED2Q9BTP6 218 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 DNAJC25Q9H1X3 360 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 PANK4Q9NVE7 773 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 SEPT9Q9UHD8 586 aaPredicted RBP14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 PCDHA2Q9Y5H9 948 aa14.02□□□□□ -0.17
SSSCA1-203ENST00000526877 LPXNO60711 386 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 TBCAO75347 108 aaKnown RBP14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 AMHP03971 560 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 GUCY2CP25092 1073 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 GIT2Q14161 759 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 DPCR1Q3MIW9 517 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 CT47A1Q5JQC4 288 aaPredicted RBP14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 FAM117BQ6P1L5 589 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 C1orf186Q6ZWK4 172 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 ANO5Q75V66 913 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 TRMT1LQ7Z2T5 733 aaKnown RBP14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 PPM1EQ8WY54 764 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 ARNTL2Q8WYA1 636 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 CEP170P1Q96L14 293 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 RUSC1Q9BVN2 902 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 TIPINQ9BVW5 301 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 COL25A1Q9BXS0 654 aaPredicted RBP14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 ZHX3Q9H4I2 956 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 ODF2LQ9ULJ1 636 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 MTCH2Q9Y6C9 303 aa14.01□□□□□ -0.17
SSSCA1-203ENST00000526877 TTC3P53804 2025 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 REV3LO60673 3130 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 NPHP3-ACAD11A0A0J9YXS1 232 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 LINC01553A4QN01 128 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 ZBTB42B2RXF5 422 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 FAM13AO94988 1023 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 STBD1O95210 358 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 GHRP10912 638 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 GAP43P17677 238 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 PPP1R2P41236 205 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 ZNF165P49910 485 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 ERVK-21P61565 698 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 MRPS6P82932 125 aaKnown RBP14□□□□□ -0.17
SSSCA1-203ENST00000526877 RAD51AP2Q09MP3 1159 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 STIM1Q13586 685 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 CCDC85BQ15834 202 aaPredicted RBP14□□□□□ -0.17
SSSCA1-203ENST00000526877 FBXO47Q5MNV8 452 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 MTHFD1LQ6UB35 978 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 RSPH3Q86UC2 560 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 MYOCDQ8IZQ8 938 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 FAM200AQ8TCP9 573 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
SSSCA1-203ENST00000526877 ATP8B4Q8TF62 1192 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 BBXQ8WY36 941 aaPredicted RBP14□□□□□ -0.17
SSSCA1-203ENST00000526877 APBB2Q92870 758 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 REEP2Q9BRK0 252 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 NIFKQ9BYG3 293 aaKnown RBP14□□□□□ -0.17
SSSCA1-203ENST00000526877 IFIH1Q9BYX4 1025 aaKnown RBP14□□□□□ -0.17
SSSCA1-203ENST00000526877 AGO3Q9H9G7 860 aaKnown RBP14□□□□□ -0.17
SSSCA1-203ENST00000526877 CYP26B1Q9NR63 512 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 PPME1Q9Y570 386 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 INSL6Q9Y581 213 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 COL4A3BPQ9Y5P4 624 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 CDY2AQ9Y6F7 541 aa14□□□□□ -0.17
SSSCA1-203ENST00000526877 SMIM35A0A1B0GVV1 85 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 ENPP3O14638 875 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 HBP1O60381 514 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 USO1O60763 962 aaKnown RBP13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 DGAT1O75907 488 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 KLRC1P26715 233 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 NPEPPSP55786 919 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 COASYQ13057 564 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 MTERF2Q49AM1 385 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 PLA2G4FQ68DD2 849 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 C11orf57Q6ZUT1 292 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms