RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 ZNF804BA4D1E1 1349 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 UTYO14607 1347 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 PNMA6EA0A0J9YXQ4 647 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 GLTPD2A6NH11 291 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 PSMD14O00487 310 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 GNAI2P04899 355 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 THBDP07204 575 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 CSF1RP07333 972 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 GYG1P46976 350 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 GMPSP49915 693 aaPredicted RBP6.36□□□□□ -1.39
SVIP-202ENST00000525670 RRP1P56182 461 aaKnown RBP6.36□□□□□ -1.39
SVIP-202ENST00000525670 KIAA2012Q0VF49 1180 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 CHAF1AQ13111 956 aaPredicted RBP6.36□□□□□ -1.39
SVIP-202ENST00000525670 NT5DC1Q5TFE4 455 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 MBLAC2Q68D91 279 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 IQCEQ6IPM2 695 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 DCP2Q8IU60 420 aaKnown RBP6.36□□□□□ -1.39
SVIP-202ENST00000525670 CARFQ8N187 725 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 SUPT20HQ8NEM7 779 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 EYA3Q99504 573 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 USP40Q9NVE5 1235 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 SCAF8Q9UPN6 1271 aaKnown RBP6.36□□□□□ -1.39
SVIP-202ENST00000525670 PSME4Q14997 1843 aa6.36□□□□□ -1.39
SVIP-202ENST00000525670 MED23Q9ULK4 1368 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 PRICKLE3O43900 615 aaPredicted RBP6.35□□□□□ -1.39
SVIP-202ENST00000525670 GNAI3P08754 354 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 ADORA1P30542 326 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 EPS15P42566 896 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 RFX5P48382 616 aaPredicted RBP6.35□□□□□ -1.39
SVIP-202ENST00000525670 PLP2Q04941 152 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 CXCL9Q07325 125 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 OS9Q13438 667 aaPredicted RBP6.35□□□□□ -1.39
SVIP-202ENST00000525670 RTP5Q14D33 572 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 RABL6Q3YEC7 729 aaPredicted RBP6.35□□□□□ -1.39
SVIP-202ENST00000525670 DBX2Q6ZNG2 339 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 HOMEZQ8IX15 550 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 ARHGAP45Q92619 1136 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 PPP1R14AQ96A00 147 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 NOX5Q96PH1 765 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 RTFDC1Q9BY42 306 aaPredicted RBP6.35□□□□□ -1.39
SVIP-202ENST00000525670 NKX2-4Q9H2Z4 354 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 PCDH18Q9HCL0 1135 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 SPATA6Q9NWH7 488 aaPredicted RBP6.35□□□□□ -1.39
SVIP-202ENST00000525670 MARCH2Q9P0N8 246 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 SIT1Q9Y3P8 196 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 ARAP2Q8WZ64 1704 aa6.35□□□□□ -1.39
SVIP-202ENST00000525670 COL1A1P02452 1464 aaPredicted RBP6.34□□□□□ -1.39
SVIP-202ENST00000525670 FZD9O00144 591 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 NOBOXO60393 691 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 SARSP49591 514 aaKnown RBP6.34□□□□□ -1.39
SVIP-202ENST00000525670 MVPQ14764 893 aaKnown RBP6.34□□□□□ -1.39
SVIP-202ENST00000525670 INF2Q27J81 1249 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 TBC1D10BQ4KMP7 808 aaPredicted RBP6.34□□□□□ -1.39
SVIP-202ENST00000525670 UBXN11Q5T124 520 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 DLK2Q6UY11 383 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 VPS37DQ86XT2 251 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 NPLOC4Q8TAT6 608 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 FRS2Q8WU20 508 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 ZBTB8AQ96BR9 441 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 AP5M1Q9H0R1 490 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 PODXL2Q9NZ53 605 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 NTMQ9P121 344 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 HACL1Q9UJ83 578 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 EXOC6BQ9Y2D4 811 aa6.34□□□□□ -1.39
SVIP-202ENST00000525670 SCN4AP35499 1836 aa6.34□□□□□ -1.4
SVIP-202ENST00000525670 ZNF609O15014 1411 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 ASTN2O75129 1339 aaPredicted RBP6.33□□□□□ -1.4
SVIP-202ENST00000525670 C22orf46C9J442 243 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 EYA2O00167 538 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 SMAD7O15105 426 aaKnown RBP6.33□□□□□ -1.4
SVIP-202ENST00000525670 FRAT2O75474 233 aaPredicted RBP6.33□□□□□ -1.4
SVIP-202ENST00000525670 CYP2C8P10632 490 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 HOXC12P31275 282 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 EPHX2P34913 555 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 CYP4F3Q08477 520 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 TFCP2Q12800 502 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 ATP2B3Q16720 1220 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 TNNI3KQ59H18 835 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 E4F1Q66K89 784 aaPredicted RBP6.33□□□□□ -1.4
SVIP-202ENST00000525670 CEP85Q6P2H3 762 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 ATG9AQ7Z3C6 839 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 GPC2Q8N158 579 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.33□□□□□ -1.4
SVIP-202ENST00000525670 SEC14L1Q92503 715 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 DDX11Q96FC9 970 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 BDH2Q9BUT1 245 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 ANKRD2Q9GZV1 360 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 TAF1DQ9H5J8 278 aaPredicted RBP6.33□□□□□ -1.4
SVIP-202ENST00000525670 ZNF408Q9H9D4 720 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 CAPN10Q9HC96 672 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 CNOT11Q9UKZ1 510 aaKnown RBP6.33□□□□□ -1.4
SVIP-202ENST00000525670 PCDHAC2Q9Y5I4 1007 aa6.33□□□□□ -1.4
SVIP-202ENST00000525670 MROH5Q6ZUA9 1318 aa6.32□□□□□ -1.4
SVIP-202ENST00000525670 TRAF5O00463 557 aa6.32□□□□□ -1.4
SVIP-202ENST00000525670 SGSM2O43147 1006 aa6.32□□□□□ -1.4
SVIP-202ENST00000525670 SMARCA5O60264 1052 aaPredicted RBP6.32□□□□□ -1.4
SVIP-202ENST00000525670 C8BP07358 591 aa6.32□□□□□ -1.4
SVIP-202ENST00000525670 SLC5A1P13866 664 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms