RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 PTPN11Q06124 597 aaPredicted RBP7.19□□□□□ -1.26
CD44-214ENST00000525211 EHHADHQ08426 723 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 KCNA1Q09470 495 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 LAMTOR4Q0VGL1 99 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 SKIV2LQ15477 1246 aaKnown RBP7.19□□□□□ -1.26
CD44-214ENST00000525211 NFKBIBQ15653 356 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 CAMK4Q16566 473 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 ZC2HC1CQ53FD0 456 aaPredicted RBP7.19□□□□□ -1.26
CD44-214ENST00000525211 FAM26DQ5JW98 314 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 DMRTA1Q5VZB9 504 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 CCDC73Q6ZRK6 1079 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 SV2BQ7L1I2 683 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 C16orf59Q7L2K0 433 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 OTUD6AQ7L8S5 288 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 FAM228AQ86W67 206 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 SFR1Q86XK3 245 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 RHPN2Q8IUC4 686 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 TMEM130Q8N3G9 435 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 IQUBQ8NA54 791 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 MARVELD3Q96A59 401 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 GBP4Q96PP9 640 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 OSMRQ99650 979 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 C7orf25Q9BPX7 421 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 NT5C3AQ9H0P0 336 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 TMEM134Q9H6X4 195 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 ATP6V0A4Q9HBG4 840 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 IFT122Q9HBG6 1241 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 CCDC39Q9UFE4 941 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 AKT3Q9Y243 479 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 NOC2LQ9Y3T9 749 aaKnown RBP7.19□□□□□ -1.26
CD44-214ENST00000525211 FRMD3A2A2Y4 597 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 KIAA0355O15063 1070 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 MAGEB2O15479 319 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 DKC1O60832 514 aaKnown RBP eCLIP7.18□□□□□ -1.26
CD44-214ENST00000525211 DGAT1O75907 488 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 CLTBP09497 229 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 ACRP10323 421 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 GHRP10912 638 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 TXLNAP40222 546 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 NPTX2P47972 431 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 RGS19P49795 217 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 ZNF131P52739 623 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 MRPS6P82932 125 aaKnown RBP7.18□□□□□ -1.26
CD44-214ENST00000525211 RBL2Q08999 1139 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 COASYQ13057 564 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 LPIN1Q14693 890 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 KMT5BQ4FZB7 885 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 RPAINQ86UA6 219 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 RTN4RL1Q86UN2 441 aaPredicted RBP7.18□□□□□ -1.26
CD44-214ENST00000525211 CDR2LQ86X02 465 aaPredicted RBP7.18□□□□□ -1.26
CD44-214ENST00000525211 SMYD4Q8IYR2 804 aaPredicted RBP7.18□□□□□ -1.26
CD44-214ENST00000525211 RNF149Q8NC42 400 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 CNNM3Q8NE01 707 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 ZSWIM2Q8NEG5 633 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 LINC01599Q8WXQ3 324 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 BADQ92934 168 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 NLRP4Q96MN2 994 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 TOX2Q96NM4 488 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 CELF4Q9BZC1 486 aaKnown RBP7.18□□□□□ -1.26
CD44-214ENST00000525211 HAPLN2Q9GZV7 340 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 TMX1Q9H3N1 280 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 HIPK3Q9H422 1215 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 CLSTN2Q9H4D0 955 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 PRDM5Q9NQX1 630 aaPredicted RBP7.18□□□□□ -1.26
CD44-214ENST00000525211 TMEM39AQ9NV64 488 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 GINS2Q9Y248 185 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 GDAQ9Y2T3 454 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 PCDHA5Q9Y5H7 936 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 COL4A3BPQ9Y5P4 624 aa7.18□□□□□ -1.26
CD44-214ENST00000525211 LOXHD1Q8IVV2 1947 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 GOLGA6L4A6NEF3 574 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 DCDC2CA8MYV0 355 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 ANKRD63C9JTQ0 380 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 BIN1O00499 593 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 MEFVO15553 781 aaPredicted RBP7.17□□□□□ -1.26
CD44-214ENST00000525211 PLS3P13797 630 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 IDEP14735 1019 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 CSF2RAP15509 400 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 CD46P15529 392 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 CD52P31358 61 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 SARSP49591 514 aaKnown RBP7.17□□□□□ -1.26
CD44-214ENST00000525211 PTENP60484 403 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 ASIC1P78348 528 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 MBTD1Q05BQ5 628 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 STK4Q13043 487 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 POSTNQ15063 836 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 FBXO47Q5MNV8 452 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 NT5DC1Q5TFE4 455 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 IER5Q5VY09 327 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 EEF1DP3Q658K8 133 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 CNNM4Q6P4Q7 775 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 SLC39A4Q6P5W5 647 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 LRRC8DQ7L1W4 858 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 TMCO2Q7Z6W1 182 aaPredicted RBP7.17□□□□□ -1.26
CD44-214ENST00000525211 DEFB128Q7Z7B8 93 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 CEP57L1Q8IYX8 460 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 KIAA0895Q8NCT3 520 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 TMEM161BQ8NDZ6 487 aa7.17□□□□□ -1.26
CD44-214ENST00000525211 SPATA20Q8TB22 786 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms