RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 COG1Q8WTW3 980 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 FNBP1Q96RU3 617 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 FIZ1Q96SL8 496 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 TBX20Q9UMR3 447 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 IVNS1ABPQ9Y6Y0 642 aa12.79□□□□□ -0.36
PTPRK-216ENST00000524481 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-216ENST00000524481 PHACTR2O75167 634 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 TADA3O75528 432 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 UBA1P22314 1058 aaKnown RBP12.78□□□□□ -0.36
PTPRK-216ENST00000524481 SNRNP35Q16560 246 aaKnown RBP12.78□□□□□ -0.36
PTPRK-216ENST00000524481 MEA1Q16626 185 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 SRGAP1Q7Z6B7 1085 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 GSPT2Q8IYD1 628 aaKnown RBP12.78□□□□□ -0.36
PTPRK-216ENST00000524481 GPRASP2Q96D09 838 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 TMEM206Q9H813 350 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 LUC7LQ9NQ29 371 aaKnown RBP12.78□□□□□ -0.36
PTPRK-216ENST00000524481 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 MYH10P35580 1976 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 RPTORQ8N122 1335 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 EFCAB8A8MWE9 144 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 MXI1P50539 228 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 COBLL1Q53SF7 1204 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 NAA35Q5VZE5 725 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 RHPN2Q8IUC4 686 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 CDHR1Q96JP9 859 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 NOX5Q96PH1 765 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 INTS2Q9H0H0 1204 aaKnown RBP12.78□□□□□ -0.36
PTPRK-216ENST00000524481 PLCB1Q9NQ66 1216 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 ST7Q9NRC1 585 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 RBPJLQ9UBG7 517 aa12.78□□□□□ -0.36
PTPRK-216ENST00000524481 INO80B-WBP1J3KQ70 363 aa12.77□□□□□ -0.36
PTPRK-216ENST00000524481 TUBB4AP04350 444 aa12.77□□□□□ -0.36
PTPRK-216ENST00000524481 ZNF394Q53GI3 561 aa12.77□□□□□ -0.36
PTPRK-216ENST00000524481 DPH6Q7L8W6 267 aa12.77□□□□□ -0.36
PTPRK-216ENST00000524481 NEK9Q8TD19 979 aa12.77□□□□□ -0.36
PTPRK-216ENST00000524481 INO80BQ9C086 356 aaPredicted RBP12.77□□□□□ -0.36
PTPRK-216ENST00000524481 ZMYM2Q9UBW7 1377 aa12.77□□□□□ -0.36
PTPRK-216ENST00000524481 MYH11P35749 1972 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 ARIH2O95376 493 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 OSBPP22059 807 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 CCL15Q16663 113 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 HGSNATQ68CP4 663 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 PHLDB3Q6NSJ2 640 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 THNSL1Q8IYQ7 743 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 CEP112Q8N8E3 955 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
PTPRK-216ENST00000524481 TAF1DQ9H5J8 278 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-216ENST00000524481 ATP6V0A4Q9HBG4 840 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 PDE11AQ9HCR9 933 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 KCND1Q9NSA2 647 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 CELF2O95319 508 aaKnown RBP12.77□□□□□ -0.37
PTPRK-216ENST00000524481 TMEM62Q0P6H9 643 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 EMC2Q15006 297 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 RNF19AQ9NV58 838 aa12.77□□□□□ -0.37
PTPRK-216ENST00000524481 ADGRA3Q8IWK6 1321 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 A0A1W2PQJ5 194 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 EIF3DO15371 548 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPRK-216ENST00000524481 ADRB2P07550 413 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 SUPT20HL2P0C7V6 817 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 PPATQ06203 517 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 B3GNT9Q6UX72 402 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 CHST13Q8NET6 341 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 ANKRD7Q92527 254 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 FBXO40Q9UH90 709 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 ZHX1Q9UKY1 873 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-216ENST00000524481 ARFGEF1Q9Y6D6 1849 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 SPATA31C2B4DYI2 1134 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 KCNK3O14649 394 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 CYP26A1O43174 497 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 ZSCAN20P17040 1043 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-216ENST00000524481 XKR3Q5GH77 459 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 FIGNQ5HY92 759 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 ZFYVE27Q5T4F4 411 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 SPOPLQ6IQ16 392 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 ARHGEF19Q8IW93 802 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 KLHL7Q8IXQ5 586 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 RNF149Q8NC42 400 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 TMEM161BQ8NDZ6 487 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 SLC20A1Q8WUM9 679 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 EXOC7Q9UPT5 735 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 PPP2R3BQ9Y5P8 575 aa12.76□□□□□ -0.37
PTPRK-216ENST00000524481 ATMINO43313 823 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-216ENST00000524481 DGAT1O75907 488 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 ADSSP30520 456 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 PAFAH1B1P43034 410 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 MKRN4PQ13434 485 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-216ENST00000524481 PRAMEF19Q5SWL8 479 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 DAAM2Q86T65 1068 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 TRIM58Q8NG06 486 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 TAS1R2Q8TE23 839 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 PRPF31Q8WWY3 499 aaKnown RBP12.75□□□□□ -0.37
PTPRK-216ENST00000524481 GANQ9H2C0 597 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 XPNPEP1Q9NQW7 623 aa12.75□□□□□ -0.37
PTPRK-216ENST00000524481 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-216ENST00000524481 GLTPD2A6NH11 291 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms