RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 GAAP10253 952 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 CNGB1Q14028 1251 aaPredicted RBP5.73□□□□□ -1.49
CLK4-213ENST00000523013 C16orf86Q6ZW13 317 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 ZNF627Q7L945 461 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 HOMER1Q86YM7 354 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 GSPT2Q8IYD1 628 aaKnown RBP5.73□□□□□ -1.49
CLK4-213ENST00000523013 CMTM4Q8IZR5 234 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 CLIP3Q96DZ5 547 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 NOL10Q9BSC4 688 aaKnown RBP5.73□□□□□ -1.49
CLK4-213ENST00000523013 GPR87Q9BY21 358 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 IFT57Q9NWB7 429 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 THG1LQ9NWX6 298 aaKnown RBP5.73□□□□□ -1.49
CLK4-213ENST00000523013 GPRC5BQ9NZH0 403 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 XDHP47989 1333 aa5.73□□□□□ -1.49
CLK4-213ENST00000523013 WDR33Q9C0J8 1336 aaKnown RBP5.73□□□□□ -1.49
CLK4-213ENST00000523013 MAFGO15525 162 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 STC2O76061 302 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 CD40P25942 277 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 NEK4P51957 841 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 INHBCP55103 352 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 SPIDRQ14159 915 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 PCBP1Q15365 356 aaKnown RBP eCLIP5.72□□□□□ -1.49
CLK4-213ENST00000523013 ZBTB41Q5SVQ8 909 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 MFSD5Q6N075 450 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 Q6ZPA2 131 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 PIK3C3Q8NEB9 887 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 NINJ1Q92982 152 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 ZNF496Q96IT1 587 aaPredicted RBP5.72□□□□□ -1.49
CLK4-213ENST00000523013 HIST1H2AHQ96KK5 128 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 ZNF512Q96ME7 567 aaPredicted RBP5.72□□□□□ -1.49
CLK4-213ENST00000523013 CEP89Q96ST8 783 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 HIST1H2AJQ99878 128 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 ENKD1Q9H0I2 346 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 FANCLQ9NW38 375 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.72□□□□□ -1.49
CLK4-213ENST00000523013 NCDNQ9UBB6 729 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 MYPNQ86TC9 1320 aa5.72□□□□□ -1.49
CLK4-213ENST00000523013 FSBPO95073 299 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 PCDH8O95206 1070 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 PURAQ00577 322 aaKnown RBP5.71□□□□□ -1.5
CLK4-213ENST00000523013 SEPT7Q16181 437 aaKnown RBP5.71□□□□□ -1.5
CLK4-213ENST00000523013 MAN2A1Q16706 1144 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 ZNF662Q6ZS27 426 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 SMC1BQ8NDV3 1235 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 MDGA1Q8NFP4 955 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 UIMC1Q96RL1 719 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 MNTQ99583 582 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 ING3Q9NXR8 418 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 USP36Q9P275 1121 aaKnown RBP5.71□□□□□ -1.5
CLK4-213ENST00000523013 MSRAQ9UJ68 235 aa5.71□□□□□ -1.5
CLK4-213ENST00000523013 REXO2Q9Y3B8 237 aaKnown RBP5.71□□□□□ -1.5
CLK4-213ENST00000523013 GRXCR1A8MXD5 290 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 PFKMP08237 780 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 KRT4P19013 534 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 NPEPPSP55786 919 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 CD69Q07108 199 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 GPR158Q5T848 1215 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 CNNM4Q6P4Q7 775 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 PCSK4Q6UW60 755 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 PASD1Q8IV76 773 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 UNC5BQ8IZJ1 945 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 MB21D1Q8N884 522 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 ATXN2LQ8WWM7 1075 aaKnown RBP5.7□□□□□ -1.5
CLK4-213ENST00000523013 APPBP2Q92624 585 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 ARL8AQ96BM9 186 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 PGBD4Q96DM1 585 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 FDXACB1Q9BRP7 624 aaPredicted RBP5.7□□□□□ -1.5
CLK4-213ENST00000523013 TARS2Q9BW92 718 aaKnown RBP5.7□□□□□ -1.5
CLK4-213ENST00000523013 MS4A5Q9H3V2 200 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 TRPS1Q9UHF7 1281 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 PCDHB6Q9Y5E3 794 aa5.7□□□□□ -1.5
CLK4-213ENST00000523013 A0A087X1B8 175 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 LCHNA4D1U4 455 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 FAM20BO75063 409 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 MFAP3LO75121 409 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 SEC24DO94855 1032 aaPredicted RBP5.69□□□□□ -1.5
CLK4-213ENST00000523013 LY86O95711 162 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 CFBP00751 764 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 KPNA1P52294 538 aaPredicted RBP5.69□□□□□ -1.5
CLK4-213ENST00000523013 FAM214AQ32MH5 1076 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 RABL3Q5HYI8 236 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 NAIF1Q69YI7 327 aaPredicted RBP5.69□□□□□ -1.5
CLK4-213ENST00000523013 ESPNLQ6ZVH7 1005 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 DHX37Q8IY37 1157 aaKnown RBP5.69□□□□□ -1.5
CLK4-213ENST00000523013 NIM1KQ8IY84 436 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 ULK2Q8IYT8 1036 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 C11orf21Q9P2W6 132 aa5.69□□□□□ -1.5
CLK4-213ENST00000523013 GOLGA6L6A8MZA4 724 aa5.68□□□□□ -1.5
CLK4-213ENST00000523013 RPS6KA4O75676 772 aa5.68□□□□□ -1.5
CLK4-213ENST00000523013 ALDH1A2O94788 518 aa5.68□□□□□ -1.5
CLK4-213ENST00000523013 IPO13O94829 963 aaKnown RBP5.68□□□□□ -1.5
CLK4-213ENST00000523013 PHC1P78364 1004 aa5.68□□□□□ -1.5
CLK4-213ENST00000523013 SMN1Q16637 294 aaKnown RBP5.68□□□□□ -1.5
CLK4-213ENST00000523013 APBB1IPQ7Z5R6 666 aaPredicted RBP5.68□□□□□ -1.5
CLK4-213ENST00000523013 CDYL2Q8N8U2 506 aa5.68□□□□□ -1.5
CLK4-213ENST00000523013 ZNF610Q8N9Z0 462 aa5.68□□□□□ -1.5
CLK4-213ENST00000523013 ST8SIA2Q92186 375 aa5.68□□□□□ -1.5
CLK4-213ENST00000523013 GPR101Q96P66 508 aaPredicted RBP5.68□□□□□ -1.5
CLK4-213ENST00000523013 SPTLC3Q9NUV7 552 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms