RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 CPPED1Q9BRF8 314 aaPredicted RBP4.32□□□□□ -1.72
PCM1-217ENST00000522998 SPATA5L1Q9BVQ7 753 aa4.32□□□□□ -1.72
PCM1-217ENST00000522998 SYBUQ9NX95 663 aa4.32□□□□□ -1.72
PCM1-217ENST00000522998 TESQ9UGI8 421 aaKnown RBP4.32□□□□□ -1.72
PCM1-217ENST00000522998 EPN1Q9Y6I3 576 aaPredicted RBP4.32□□□□□ -1.72
PCM1-217ENST00000522998 ZNF185O15231 689 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 MTSS1O43312 755 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 CXCR5P32302 372 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 PTH2RP49190 550 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 FNTBP49356 437 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
PCM1-217ENST00000522998 BMP8AQ7Z5Y6 402 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 ZBTB38Q8NAP3 1195 aaPredicted RBP4.31□□□□□ -1.72
PCM1-217ENST00000522998 MAML3Q96JK9 1138 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 COQ10AQ96MF6 247 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 EPC1Q9H2F5 836 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 TRPM5Q9NZQ8 1165 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 FRMD4BQ9Y2L6 1034 aa4.31□□□□□ -1.72
PCM1-217ENST00000522998 MYADML2A6NDP7 307 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 RNASET2O00584 256 aaKnown RBP4.3□□□□□ -1.72
PCM1-217ENST00000522998 HOXA3O43365 443 aaPredicted RBP4.3□□□□□ -1.72
PCM1-217ENST00000522998 HKR1P10072 659 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 APOBEC3AP31941 199 aaPredicted RBP4.3□□□□□ -1.72
PCM1-217ENST00000522998 SEC24CP53992 1094 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 RAB33AQ14088 237 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 VPS72Q15906 364 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 METTL24Q5JXM2 366 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 LILRA3Q8N6C8 439 aaPredicted RBP4.3□□□□□ -1.72
PCM1-217ENST00000522998 C2orf69Q8N8R5 385 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 GLB1L3Q8NCI6 653 aaPredicted RBP4.3□□□□□ -1.72
PCM1-217ENST00000522998 SIMC1Q8NDZ2 872 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 OR52N2Q8NGI0 321 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 LINC00476Q8WZB0 136 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 EXOC2Q96KP1 924 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 PDCD2LQ9BRP1 358 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 NDC1Q9BTX1 674 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 AKIP1Q9NQ31 210 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 NDOR1Q9UHB4 597 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 PFDN2Q9UHV9 154 aa4.3□□□□□ -1.72
PCM1-217ENST00000522998 UBA6A0AVT1 1052 aaPredicted RBP4.29□□□□□ -1.72
PCM1-217ENST00000522998 ZBTB7CA1YPR0 619 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 NCR1O76036 304 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 NDUFA10O95299 355 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 CTGFP29279 349 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 SSRP1Q08945 709 aaKnown RBP4.29□□□□□ -1.72
PCM1-217ENST00000522998 TTC38Q5R3I4 469 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 PRAMEF9Q5VWM5 478 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 GDF7Q7Z4P5 450 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 FAM83AQ86UY5 434 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 FAM98AQ8NCA5 519 aaKnown RBP4.29□□□□□ -1.72
PCM1-217ENST00000522998 MAGEB10Q96LZ2 347 aaPredicted RBP4.29□□□□□ -1.72
PCM1-217ENST00000522998 DCLRE1CQ96SD1 692 aaKnown RBP4.29□□□□□ -1.72
PCM1-217ENST00000522998 LRFN3Q9BTN0 628 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 DHRS4Q9BTZ2 278 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 BOCQ9BWV1 1114 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 TRIM55Q9BYV6 548 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 CPEB1Q9BZB8 566 aaKnown RBP4.29□□□□□ -1.72
PCM1-217ENST00000522998 HAPLN2Q9GZV7 340 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 SLC52A2Q9HAB3 445 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 SYNPO2Q9UMS6 1093 aa4.29□□□□□ -1.72
PCM1-217ENST00000522998 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.29□□□□□ -1.72
PCM1-217ENST00000522998 MRPS23Q9Y3D9 190 aaKnown RBP4.29□□□□□ -1.72
PCM1-217ENST00000522998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.28□□□□□ -1.72
PCM1-217ENST00000522998 GAGE12BA1L429 117 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 GAGE12HA6NDE8 117 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 NRP1O14786 923 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 DNAJC6O75061 913 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 EFCAB14O75071 495 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 KRT37O76014 449 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 ZBTB48P10074 688 aaPredicted RBP4.28□□□□□ -1.72
PCM1-217ENST00000522998 BCAR1P56945 870 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 FOXI1Q12951 378 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 MTERF2Q49AM1 385 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 TMEM177Q53S58 311 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 RPGRQ92834 1020 aaKnown RBP4.28□□□□□ -1.72
PCM1-217ENST00000522998 UIMC1Q96RL1 719 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 TINF2Q9BSI4 451 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 RNF7Q9UBF6 113 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 HDAC5Q9UQL6 1122 aa4.28□□□□□ -1.72
PCM1-217ENST00000522998 PDPK1O15530 556 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 DIAPH1O60610 1272 aaKnown RBP4.27□□□□□ -1.73
PCM1-217ENST00000522998 BMPR1AP36894 532 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 PLA2G5P39877 138 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 KIF11P52732 1056 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 GUCY1B3Q02153 619 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 BEAN1Q3B7T3 259 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 BRAPQ7Z569 592 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 IGSF22Q8N9C0 903 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 GSTCDQ8NEC7 633 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
PCM1-217ENST00000522998 TUBGCP5Q96RT8 1024 aa4.27□□□□□ -1.73
PCM1-217ENST00000522998 PIPSLA2A3N6 862 aa4.26□□□□□ -1.73
PCM1-217ENST00000522998 UNCXA6NJT0 531 aa4.26□□□□□ -1.73
PCM1-217ENST00000522998 NPTXRO95502 500 aa4.26□□□□□ -1.73
PCM1-217ENST00000522998 CFBP00751 764 aa4.26□□□□□ -1.73
PCM1-217ENST00000522998 FAM153BP0C7A2 387 aa4.26□□□□□ -1.73
PCM1-217ENST00000522998 BLOC1S1P78537 153 aa4.26□□□□□ -1.73
PCM1-217ENST00000522998 MAN2A1Q16706 1144 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms