RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CEP290O15078 2479 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 CCDC169A6NNP5 214 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 CCL5P13501 91 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 ACLYP53396 1101 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 PTPN11Q06124 597 aaPredicted RBP14.37□□□□□ -0.11
CPNE3-205ENST00000522240 DRP2Q13474 957 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 CAPSQ13938 189 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 TFDP1Q14186 410 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 EDRF1Q3B7T1 1238 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 CDCA2Q69YH5 1023 aaPredicted RBP14.37□□□□□ -0.11
CPNE3-205ENST00000522240 HAUS6Q7Z4H7 955 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 MAP4K3Q8IVH8 894 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 NOC3LQ8WTT2 800 aaKnown RBP14.37□□□□□ -0.11
CPNE3-205ENST00000522240 ZNF333Q96JL9 665 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 ACCSQ96QU6 501 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 MAP7D2Q96T17 732 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 NFKBIZQ9BYH8 718 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 C2orf40Q9H1Z8 148 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 KCTD10Q9H3F6 313 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 TMEM206Q9H813 350 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 TYW1Q9NV66 732 aaKnown RBP14.37□□□□□ -0.11
CPNE3-205ENST00000522240 CGNQ9P2M7 1197 aaKnown RBP14.37□□□□□ -0.11
CPNE3-205ENST00000522240 SUCLA2Q9P2R7 463 aaPredicted RBP14.37□□□□□ -0.11
CPNE3-205ENST00000522240 HDAC6Q9UBN7 1215 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 GTF2IRD1Q9UHL9 959 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 NFE2L3Q9Y4A8 694 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 ADGRA3Q8IWK6 1321 aa14.37□□□□□ -0.11
CPNE3-205ENST00000522240 LRRIQ4A6NIV6 560 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 KBTBD13C9JR72 458 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 DNM1LO00429 736 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 PDXKO00764 312 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 SLC16A4O15374 487 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 PRPF6O94906 941 aaKnown RBP14.36□□□□□ -0.11
CPNE3-205ENST00000522240 RPLP2P05387 115 aaKnown RBP14.36□□□□□ -0.11
CPNE3-205ENST00000522240 PMS1P54277 932 aaKnown RBP14.36□□□□□ -0.11
CPNE3-205ENST00000522240 STX17P56962 302 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 SNRPFP62306 86 aaKnown RBP14.36□□□□□ -0.11
CPNE3-205ENST00000522240 LAMTOR4Q0VGL1 99 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 MTFR1Q15390 333 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 NFIL3Q16649 462 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 NBPF20Q3BBV1 942 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 NELFCDQ8IXH7 590 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 ZC3H3Q8IXZ2 948 aaKnown RBP14.36□□□□□ -0.11
CPNE3-205ENST00000522240 ZNF710Q8N1W2 664 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 METTL13Q8N6R0 699 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 DEPTORQ8TB45 409 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 GOLGA5Q8TBA6 731 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 PRPF31Q8WWY3 499 aaKnown RBP14.36□□□□□ -0.11
CPNE3-205ENST00000522240 GLT1D1Q96MS3 346 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 SEZ6LQ9BYH1 1024 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 SEMA6BQ9H3T3 888 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 TMEM134Q9H6X4 195 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 OGDHLQ9ULD0 1010 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 EXOC7Q9UPT5 735 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 PHF24Q9UPV7 400 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 TRAF3IP3Q9Y228 551 aa14.36□□□□□ -0.11
CPNE3-205ENST00000522240 DENND3A2RUS2 1198 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 TRIM49BA6NDI0 452 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 CALUO43852 315 aaPredicted RBP14.35□□□□□ -0.11
CPNE3-205ENST00000522240 FGFR1OPO95684 399 aaKnown RBP14.35□□□□□ -0.11
CPNE3-205ENST00000522240 CYP2C9P11712 490 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 HOXD13P35453 343 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 EFNA5P52803 228 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 CDC42EP1Q00587 391 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 TPD52L1Q16890 204 aaPredicted RBP14.35□□□□□ -0.11
CPNE3-205ENST00000522240 ZC2HC1CQ53FD0 456 aaPredicted RBP14.35□□□□□ -0.11
CPNE3-205ENST00000522240 TAF2Q6P1X5 1199 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 ZNF410Q86VK4 478 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 ZBTB8OSQ8IWT0 167 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 DUSP9Q99956 384 aaKnown RBP14.35□□□□□ -0.11
CPNE3-205ENST00000522240 KIFC3Q9BVG8 833 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 GBP3Q9H0R5 595 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 RNF208Q9H0X6 261 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 TBX20Q9UMR3 447 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 AKT3Q9Y243 479 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 EVPLQ92817 2033 aa14.35□□□□□ -0.11
CPNE3-205ENST00000522240 A0A1W2PQ45 241 aaPredicted RBP14.34□□□□□ -0.11
CPNE3-205ENST00000522240 A0A1W2PQY0 241 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 PIGRP01833 764 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 ZNF18P17022 549 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 CAPN2P17655 700 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 PHKA2P46019 1235 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 CHMP4BP1P59074 171 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 SPAG1Q07617 926 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 HIC1Q14526 733 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 CDKAL1Q5VV42 579 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 ANKRD40Q6AI12 368 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 HS2ST1Q7LGA3 356 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 RHPN2Q8IUC4 686 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 C12orf56Q8IXR9 622 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 KIAA0319LQ8IZA0 1049 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 CSGALNACT2Q8N6G5 542 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 TMEM174Q8WUU8 243 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 ZBTB10Q96DT7 871 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 CEP63Q96MT8 703 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
CPNE3-205ENST00000522240 CCDC113Q9H0I3 377 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms