RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PRR16Q569H4 304 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 TWF2Q6IBS0 349 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 DGLUCYQ7Z3D6 616 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 KCNG4Q8TDN1 519 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 LPPQ93052 612 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 DISC1Q9NRI5 854 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 FAM217BQ9NTX9 383 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 FAM105AQ9NUU6 356 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 DNAJB4Q9UDY4 337 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 BRPF3Q9ULD4 1205 aa13.92□□□□□ -0.18
TRAPPC9-204ENST00000518723 CACNA1BQ00975 2339 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 IGKV6-21A0A0C4DH24 114 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 KRBA1A5PL33 1030 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 MEIS3P2A8K0S8 358 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 NARSO43776 548 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 SFNP31947 248 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 EXOSC10Q01780 885 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 DRP2Q13474 957 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 UGCGQ16739 394 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 ZNF410Q86VK4 478 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 REXO1Q8N1G1 1221 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 NXPE3Q969Y0 559 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 CEP89Q96ST8 783 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 RIT2Q99578 217 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 INO80BQ9C086 356 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 WDR6Q9NNW5 1121 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 EPS15L1Q9UBC2 864 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 PIN4Q9Y237 131 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 INPP5FQ9Y2H2 1132 aa13.91□□□□□ -0.18
TRAPPC9-204ENST00000518723 GPR179Q6PRD1 2367 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 A0A087WZ62 844 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 GOLGA8BA8MQT2 603 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 ADAMTS3O15072 1205 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 B4GALT3O60512 393 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 PAPLNO95428 1278 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 CFHP08603 1231 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 CDC27P30260 824 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 DNM2P50570 870 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 JAK3P52333 1124 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 PUM1Q14671 1186 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 PHLDB3Q6NSJ2 640 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 ZC3H14Q6PJT7 736 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 ZNF280BQ86YH2 543 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 STAMQ92783 540 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 PGBD4Q96DM1 585 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 FDXACB1Q9BRP7 624 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 TMEM175Q9BSA9 504 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 ESYT1Q9BSJ8 1104 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 NIFKQ9BYG3 293 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 GBP3Q9H0R5 595 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 C6orf50Q9HD87 102 aa13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 TPRP12270 2363 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-204ENST00000518723 STK25O00506 426 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 MSH4O15457 936 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 SRFP11831 508 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 GNA11P29992 359 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 AGMOQ6ZNB7 445 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 DHX32Q7L7V1 743 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 KIAA2013Q8IYS2 634 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 SLC44A3Q8N4M1 653 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 RDM1Q8NG50 284 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 RSAD2Q8WXG1 361 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 TBC1D17Q9HA65 648 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 MAN1C1Q9NR34 630 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 DLL3Q9NYJ7 618 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 DLGAP2Q9P1A6 1054 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 DPP7Q9UHL4 492 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 R4GN57 208 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 CLUHO75153 1309 aa13.89□□□□□ -0.19
TRAPPC9-204ENST00000518723 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 EDIL3O43854 480 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 GAS7O60861 476 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 DDHD2O94830 711 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 STBD1O95210 358 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 SOD2P04179 222 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 ALDH2P05091 517 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 SSBP05455 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 RFX1P22670 979 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 GBP2P32456 591 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 XKR3Q5GH77 459 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 RNF20Q5VTR2 975 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 CATSPER4Q7RTX7 472 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 MRPL10Q7Z7H8 261 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 RUBCNQ92622 972 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 SLC5A5Q92911 643 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 RPS6KC1Q96S38 1066 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 MYADMQ96S97 322 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 HERC2P3Q9BVR0 1158 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 UNC45AQ9H3U1 944 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 AGPAT5Q9NUQ2 364 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 KANSL3Q9P2N6 904 aa13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 SUCLA2Q9P2R7 463 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-204ENST00000518723 CA14Q9ULX7 337 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms