RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 ABCD1P33897 745 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 NPEPPSP55786 919 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PTENP60484 403 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 ATP2C1P98194 919 aaPredicted RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 GUCY1B3Q02153 619 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CAPSQ13938 189 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 GIT2Q14161 759 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CTTNQ14247 550 aaKnown RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 BMS1Q14692 1282 aaKnown RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 FAM187BQ17R55 369 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CTC1Q2NKJ3 1217 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 HYIQ5T013 277 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 KRT79Q5XKE5 535 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CATSPER3Q86XQ3 398 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 COLGALT1Q8NBJ5 622 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 URGCPQ8TCY9 931 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 SNX29Q8TEQ0 813 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 KIFAP3Q92845 792 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 KCNN1Q92952 543 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 ZNF558Q96NG5 402 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CASD1Q96PB1 797 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PPP1R16BQ96T49 567 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 UHRF1Q96T88 793 aaPredicted RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 POP1Q99575 1024 aaKnown RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 NGRNQ9NPE2 291 aaKnown RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PRMT7Q9NVM4 692 aaPredicted RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 KANSL3Q9P2N6 904 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PRKAG3Q9UGI9 489 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PUF60Q9UHX1 559 aaKnown RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 KCNG1Q9UIX4 513 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PLAGL2Q9UPG8 496 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 MORC2Q9Y6X9 1032 aaPredicted RBP6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 MYH15Q9Y2K3 1946 aa6.66□□□□□ -1.34
SCARNA18.1-201ENST00000516330 MYO9BQ13459 2157 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CUL9Q8IWT3 2517 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 RFXAPO00287 272 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 TSPAN1O60635 241 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 MED24O75448 989 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 FGF18O76093 207 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CD2BP2O95400 341 aaKnown RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 ITGB1P05556 798 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 SPATA31C1P0DKV0 1188 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 FGFR1P11362 822 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 NCLP19338 710 aaKnown RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 GLRA2P23416 452 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 ARL2P36404 184 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 TECP42680 631 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 EFNA5P52803 228 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 FOSBP53539 338 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 KRT17Q04695 432 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 MBTD1Q05BQ5 628 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PTGDRQ13258 359 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CCDC85BQ15834 202 aaPredicted RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PAN2Q504Q3 1202 aaKnown RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 TCEAL5Q5H9L2 206 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CLLU1OSQ5K130 101 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 SPOUT1Q5T280 376 aaKnown RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 POTEGQ6S5H5 508 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 KCNT2Q6UVM3 1135 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 DTHD1Q6ZMT9 781 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 APBB1IPQ7Z5R6 666 aaPredicted RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 GPR65Q8IYL9 337 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 THNSL1Q8IYQ7 743 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 KLHL23Q8NBE8 558 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 ADAMTS19Q8TE59 1207 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 POF1BQ8WVV4 589 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PRPF31Q8WWY3 499 aaKnown RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 PPM1EQ8WY54 764 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 MRPS27Q92552 414 aaKnown RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 TMEM169Q96HH4 297 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 DRC1Q96MC2 740 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 SH2D3AQ9BRG2 576 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 ADPGKQ9BRR6 497 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 TMEM175Q9BSA9 504 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 BACH2Q9BYV9 841 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 TRIM6Q9C030 488 aaPredicted RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 POLR3FQ9H1D9 316 aaPredicted RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 CWH43Q9H720 699 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 RSAD1Q9HA92 442 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 RNF19AQ9NV58 838 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 LRWD1Q9UFC0 647 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 IRAK3Q9Y616 596 aa6.65□□□□□ -1.34
SCARNA18.1-201ENST00000516330 REV3LO60673 3130 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 LRRIQ4A6NIV6 560 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 H0YCG3 227 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 INO80B-WBP1J3KQ70 363 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 K7ELQ4 463 aaPredicted RBP6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 TNFRSF10AO00220 468 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 FSCN2O14926 492 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 N4BP3O15049 544 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 GRM6O15303 877 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 BMP1P13497 986 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CYP11B2P19099 503 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ATP2B1P20020 1258 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 GUCY2CP25092 1073 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 CCT6AP40227 531 aaKnown RBP6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 ALDH7A1P49419 539 aaKnown RBP6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 GRIK3Q13003 919 aa6.64□□□□□ -1.35
SCARNA18.1-201ENST00000516330 DMP1Q13316 513 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms