RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
TRIM41-209ENST00000515834 SERPINI1Q99574 410 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 ZMYM4Q5VZL5 1548 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 MCAMP43121 646 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 HUNKP57058 714 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 TMPRSS15P98073 1019 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 KIF23Q02241 960 aaPredicted RBP11.73□□□□□ -0.53
TRIM41-209ENST00000515834 MFN1Q8IWA4 741 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 BTN2A2Q8WVV5 523 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 KIAA1586Q9HCI6 787 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 FGFR1OP2Q9NVK5 253 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 E9PMD0 336 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 COPS2P61201 443 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 SNAPC2Q13487 334 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 FAM102AQ5T9C2 384 aaPredicted RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 MFSD4BQ5TF39 518 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 HEATR6Q6AI08 1181 aaKnown RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 XXYLT1Q8NBI6 393 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 CYTH2Q99418 400 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 TMEM47Q9BQJ4 181 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 NDST4Q9H3R1 872 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 COPEO14579 308 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 ZNF445P59923 1031 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 MGAT5BQ3V5L5 792 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 ARMC6Q6NXE6 501 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 DDIASQ8IXT1 998 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 ZNF512Q96ME7 567 aaPredicted RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 SSH2Q76I76 1423 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 OR1G1P47890 313 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 QARSP47897 775 aaKnown RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 CELF1Q92879 486 aaKnown RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 PPP1R13BQ96KQ4 1090 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 SYTL2Q9HCH5 934 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 ATG3Q9NT62 314 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 C6orf203Q9P0P8 240 aaPredicted RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 FAM135BQ49AJ0 1406 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 SLFN14P0C7P3 912 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 TBC1D19Q8N5T2 526 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 ATP9BO43861 1147 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 CCNE1P24864 410 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 PPP3CCP48454 512 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 SLFNL1Q499Z3 407 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 ADGRF4Q8IZF3 695 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 RFWD2Q8NHY2 731 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 CAPN10Q9HC96 672 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 RAD18Q9NS91 495 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 POTEB3A0JP26 581 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 POTECB2RU33 542 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 SMARCA1P28370 1054 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 SULT1E1P49888 294 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 MRPS25P82663 173 aaKnown RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 PKP1Q13835 747 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 POTEBQ6S5H4 581 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 MYRIPQ8NFW9 859 aa11.72□□□□□ -0.53
TRIM41-209ENST00000515834 GJD4Q96KN9 370 aaPredicted RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 PARK7Q99497 189 aaKnown RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 CHCHD3Q9NX63 227 aaKnown RBP11.72□□□□□ -0.53
TRIM41-209ENST00000515834 ZNF197O14709 1029 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 CALB1P05937 261 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 RPSAP08865 295 aaKnown RBP11.71□□□□□ -0.53
TRIM41-209ENST00000515834 CCT5P48643 541 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 BRINP3Q76B58 766 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 PPHLN1Q8NEY8 458 aaKnown RBP11.71□□□□□ -0.53
TRIM41-209ENST00000515834 SH3TC2Q8TF17 1288 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 RBAKQ9NYW8 714 aaPredicted RBP11.71□□□□□ -0.53
TRIM41-209ENST00000515834 SLC9A2Q9UBY0 812 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 NR3C1P04150 777 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 ESRRAP11474 423 aaPredicted RBP11.71□□□□□ -0.53
TRIM41-209ENST00000515834 CUL1Q13616 776 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 FLOT2Q14254 428 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 LMBRD2Q68DH5 695 aaPredicted RBP11.71□□□□□ -0.53
TRIM41-209ENST00000515834 IL31Q6EBC2 164 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 PKN3Q6P5Z2 889 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 BHMTQ93088 406 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 LXNQ9BS40 222 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 ZMYND12Q9H0C1 365 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 UTYO14607 1347 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 METP08581 1390 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 F5H6K3 240 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 SFNP31947 248 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 KLRC3Q07444 240 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 MARCH10Q8NA82 808 aaPredicted RBP11.71□□□□□ -0.53
TRIM41-209ENST00000515834 PGBD4Q96DM1 585 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 ZNF560Q96MR9 790 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.53
TRIM41-209ENST00000515834 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms