RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ERVK-5Q9HDB9 667 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 CXXC1Q9P0U4 656 aaPredicted RBP10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 PADI3Q9ULW8 664 aa10.84□□□□□ -0.67
TOPBP1-209ENST00000513818 TTLL13PA6NNM8 815 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 INO80B-WBP1J3KQ70 363 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 SLC16A4O15374 487 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 B4GALT5O43286 388 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 NR1I2O75469 434 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 RPLP2P05387 115 aaKnown RBP10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 IDEP14735 1019 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 EIF4BP23588 611 aaKnown RBP10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 RFC2P35250 354 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 PHKA2P46019 1235 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 NPTX2P47972 431 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 CLCN6P51797 869 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 PTENP60484 403 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 ASIC1P78348 528 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 MBTD1Q05BQ5 628 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 TFDP1Q14186 410 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 MXD4Q14582 209 aaPredicted RBP10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 SHHQ15465 462 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 CNKSR3Q6P9H4 555 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 KRBA2Q6ZNG9 492 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 CATSPER4Q7RTX7 472 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 ZNF410Q86VK4 478 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 CDR2LQ86X02 465 aaPredicted RBP10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 FMR1NBQ8N0W7 255 aaPredicted RBP10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 KCTD17Q8N5Z5 321 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 CNNM3Q8NE01 707 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 DEPTORQ8TB45 409 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 SEPT8Q92599 483 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 ERCC4Q92889 916 aaPredicted RBP10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 DNAJC19Q96DA6 116 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 PAGE5Q96GU1 130 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 IFT74Q96LB3 600 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 DRC1Q96MC2 740 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 GBP4Q96PP9 640 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 FGFBP2Q9BYJ0 223 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 TRIM9Q9C026 710 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 INO80BQ9C086 356 aaPredicted RBP10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 TNMDQ9H2S6 317 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 CUEDC2Q9H467 287 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 KBTBD4Q9NVX7 518 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 TBC1D7Q9P0N9 293 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 ST3GAL5Q9UNP4 418 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 LAMA3Q16787 3333 aa10.83□□□□□ -0.68
TOPBP1-209ENST00000513818 K7ENM7 598 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 TSPAN1O60635 241 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 ZNF202O95125 648 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 SLFN14P0C7P3 912 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 PLS3P13797 630 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 NMT1P30419 496 aaKnown RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 NAMPTP43490 491 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 DEFB103AP81534 67 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 FAM160A1Q05DH4 1040 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 DMP1Q13316 513 aaPredicted RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 SNW1Q13573 536 aaKnown RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 ODR4Q5SWX8 454 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 CDCA2Q69YH5 1023 aaPredicted RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 PSRC1Q6PGN9 363 aaPredicted RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 ZBTB8OSQ8IWT0 167 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 RPUSD2Q8IZ73 545 aaKnown RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 MYCT1Q8N699 235 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 GLIS3Q8NEA6 775 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 ENGASEQ8NFI3 743 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 CPB2Q96IY4 423 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 RNPC3Q96LT9 517 aaKnown RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 PARVGQ9HBI0 331 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 KMT5AQ9NQR1 393 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 LMBRD1Q9NUN5 540 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 KCND2Q9NZV8 630 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 ODF2LQ9ULJ1 636 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 PIN4Q9Y237 131 aaKnown RBP10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 GBF1Q92538 1859 aa10.82□□□□□ -0.68
TOPBP1-209ENST00000513818 ASAP2O43150 1006 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 FGBP02675 491 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 PRKCBP05771 671 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 PFKMP08237 780 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 SFPQP23246 707 aaKnown RBP eCLIP10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 ZNF131P52739 623 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 WDR5P61964 334 aaKnown RBP10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 UBE2HP62256 183 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 COASYQ13057 564 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 PPP2R5AQ15172 486 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 AMHR2Q16671 573 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 FAM109BQ6ICB4 259 aaPredicted RBP10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 FAM117BQ6P1L5 589 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 CLEC17AQ6ZS10 378 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 TAS1R3Q7RTX0 852 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 PYM1Q9BRP8 204 aaKnown RBP10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 TIPINQ9BVW5 301 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 CCDC113Q9H0I3 377 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 IKZF4Q9H2S9 585 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 PRO3102Q9H379 93 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 MAGEF1Q9HAY2 307 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 AGPAT5Q9NUQ2 364 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 PANK4Q9NVE7 773 aa10.81□□□□□ -0.68
TOPBP1-209ENST00000513818 DACT1Q9NYF0 836 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms