RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 EFCAB12Q6NXP0 572 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 SLC39A4Q6P5W5 647 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 FILIP1Q7Z7B0 1213 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 MAP4K3Q8IVH8 894 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 C12orf56Q8IXR9 622 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 LMBR1Q8WVP7 490 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 TCP11Q8WWU5 503 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 EEF2KMTQ96G04 330 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 IFT74Q96LB3 600 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 ACCSQ96QU6 501 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 JPH2Q9BR39 696 aaPredicted RBP10.28□□□□□ -0.76
DHFR-206ENST00000513048 CCDC113Q9H0I3 377 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 TMEM206Q9H813 350 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 AGPAT3Q9NRZ7 376 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 SUCLA2Q9P2R7 463 aaPredicted RBP10.28□□□□□ -0.76
DHFR-206ENST00000513048 DDX20Q9UHI6 824 aaKnown RBP10.28□□□□□ -0.76
DHFR-206ENST00000513048 KCNG1Q9UIX4 513 aa10.28□□□□□ -0.76
DHFR-206ENST00000513048 TRIP12Q14669 1992 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 RRN3P2A6NIE6 340 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 TISP43B9A030 160 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 CALUO43852 315 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 PIGRP01833 764 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 NR3C1P04150 777 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 EDN1P05305 212 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 GJB1P08034 283 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 C6orf222P0C671 652 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 CDK11BP21127 795 aaKnown RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 SCP2P22307 547 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 GRK4P32298 578 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 PBX1P40424 430 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 COPB1P53618 953 aaKnown RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 UBASH3AP57075 661 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 MCCD1P59942 119 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 IGBP1P78318 339 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 MYBPC2Q14324 1141 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 MXD4Q14582 209 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 PPP2R5AQ15172 486 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 BRDTQ58F21 947 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 GNASQ5JWF2 1037 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 MIIPQ5JXC2 388 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 IFNLR1Q8IU57 520 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 SLC9A9Q8IVB4 645 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 PPP1R13LQ8WUF5 828 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 PSPC1Q8WXF1 523 aaKnown RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 BORCS6Q96GS4 357 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 CNOT6LQ96LI5 555 aaKnown RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 MTG1Q9BT17 334 aaPredicted RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 GBP3Q9H0R5 595 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 TMEM134Q9H6X4 195 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
DHFR-206ENST00000513048 XPNPEP3Q9NQH7 507 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 SETD4Q9NVD3 440 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 TAB2Q9NYJ8 693 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 PTPN22Q9Y2R2 807 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 TRIM17Q9Y577 477 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 NRCAMQ92823 1304 aa10.27□□□□□ -0.77
DHFR-206ENST00000513048 ANKRD63C9JTQ0 380 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 H0YCG3 227 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 CLIC2O15247 247 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 ASAP2O43150 1006 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 TEX33O43247 280 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 CBFA2T2O43439 604 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 FGFR1OPO95684 399 aaKnown RBP10.26□□□□□ -0.77
DHFR-206ENST00000513048 SERPINC1P01008 464 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 NR2F2P24468 414 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 ADSSP30520 456 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 CASP4P49662 377 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 SNRPFP62306 86 aaKnown RBP10.26□□□□□ -0.77
DHFR-206ENST00000513048 POU5F1BQ06416 359 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 ADAM9Q13443 819 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 CXCL17Q6UXB2 119 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 FAM114A1Q8IWE2 563 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 KIAA0319LQ8IZA0 1049 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 RETREG2Q8NC44 543 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 DEPTORQ8TB45 409 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 GOLGA5Q8TBA6 731 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 ANP32BQ92688 251 aaKnown RBP10.26□□□□□ -0.77
DHFR-206ENST00000513048 BEGAINQ9BUH8 593 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 KATNAL1Q9BW62 490 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 CGNQ9P2M7 1197 aaKnown RBP10.26□□□□□ -0.77
DHFR-206ENST00000513048 HDAC6Q9UBN7 1215 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 STYXL1Q9Y6J8 313 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 GRIN2DO15399 1336 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 PHLPP2Q6ZVD8 1323 aa10.26□□□□□ -0.77
DHFR-206ENST00000513048 SMIM35A0A1B0GVV1 85 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 LRRIQ4A6NIV6 560 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 LGALS16A8MUM7 142 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 CETN3O15182 167 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 SLC16A3O15427 465 aaKnown RBP10.25□□□□□ -0.77
DHFR-206ENST00000513048 MSCO60682 206 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 AKAP3O75969 853 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 GNA14O95837 355 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 RPL13P26373 211 aaKnown RBP10.25□□□□□ -0.77
DHFR-206ENST00000513048 ABCD1P33897 745 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 DNM2P50570 870 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 PTENP60484 403 aa10.25□□□□□ -0.77
DHFR-206ENST00000513048 ZNF200P98182 395 aaPredicted RBP10.25□□□□□ -0.77
DHFR-206ENST00000513048 KCNA10Q16322 511 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms