RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 ARHGAP28Q9P2N2 729 aa11.43□□□□□ -0.58
RFC1-211ENST00000509084 SUCLA2Q9P2R7 463 aaPredicted RBP11.43□□□□□ -0.58
RFC1-211ENST00000509084 HDAC6Q9UBN7 1215 aa11.43□□□□□ -0.58
RFC1-211ENST00000509084 PHF24Q9UPV7 400 aa11.43□□□□□ -0.58
RFC1-211ENST00000509084 MAPK8IP1Q9UQF2 711 aa11.43□□□□□ -0.58
RFC1-211ENST00000509084 KAT6AQ92794 2004 aa11.43□□□□□ -0.58
RFC1-211ENST00000509084 A0A0U1RQG5 324 aaPredicted RBP11.42□□□□□ -0.58
RFC1-211ENST00000509084 FSD2A1L4K1 749 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 PDXKO00764 312 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 SLC16A4O15374 487 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 CALUO43852 315 aaPredicted RBP11.42□□□□□ -0.58
RFC1-211ENST00000509084 GJB1P08034 283 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 MYBP10242 640 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 CYP2C9P11712 490 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 NMT1P30419 496 aaKnown RBP11.42□□□□□ -0.58
RFC1-211ENST00000509084 PHKA2P46019 1235 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 MRE11P49959 708 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 LAMTOR4Q0VGL1 99 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 STRN3Q13033 797 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 ITGA7Q13683 1181 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 CAPSQ13938 189 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 HSP90AA2PQ14568 343 aaPredicted RBP11.42□□□□□ -0.58
RFC1-211ENST00000509084 IQCB1Q15051 598 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 MTFR1Q15390 333 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 EDRF1Q3B7T1 1238 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 FAM47CQ5HY64 1035 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 MARCH8Q5T0T0 291 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 SPATA1Q5VX52 437 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 CDCA2Q69YH5 1023 aaPredicted RBP11.42□□□□□ -0.58
RFC1-211ENST00000509084 RSPH3Q86UC2 560 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 ZNF410Q86VK4 478 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 MAP4K3Q8IVH8 894 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 NME8Q8N427 588 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 RNF214Q8ND24 703 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 TMEM161BQ8NDZ6 487 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 ASAP3Q8TDY4 903 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 PRPF31Q8WWY3 499 aaKnown RBP11.42□□□□□ -0.58
RFC1-211ENST00000509084 BSNDQ8WZ55 320 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 RBSNQ9H1K0 784 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 TMEM134Q9H6X4 195 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 STARD7Q9NQZ5 370 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 TYW1Q9NV66 732 aaKnown RBP11.42□□□□□ -0.58
RFC1-211ENST00000509084 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
RFC1-211ENST00000509084 A0A1W2PQ45 241 aaPredicted RBP11.41□□□□□ -0.58
RFC1-211ENST00000509084 A0A1W2PQY0 241 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 DENND3A2RUS2 1198 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 PRPF6O94906 941 aaKnown RBP11.41□□□□□ -0.58
RFC1-211ENST00000509084 CASP5P51878 434 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 SOX10P56693 466 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 SPAG1Q07617 926 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 DRP2Q13474 957 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 NFIL3Q16649 462 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 TTI2Q6NXR4 508 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 MAMSTRQ6ZN01 415 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 LUZP1Q86V48 1076 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 RHPN2Q8IUC4 686 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 FAM114A1Q8IWE2 563 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 DHX40Q8IX18 779 aaKnown RBP11.41□□□□□ -0.58
RFC1-211ENST00000509084 NELFCDQ8IXH7 590 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 SYCP3Q8IZU3 236 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 RNF149Q8NC42 400 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 GLIS3Q8NEA6 775 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 FGFBP2Q9BYJ0 223 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 CRISPLD2Q9H0B8 497 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 GBP3Q9H0R5 595 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 KCTD10Q9H3F6 313 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 GRPEL1Q9HAV7 217 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 POLD4Q9HCU8 107 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
RFC1-211ENST00000509084 TRAF3IP3Q9Y228 551 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 NFE2L3Q9Y4A8 694 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 SIP14410 1827 aa11.41□□□□□ -0.58
RFC1-211ENST00000509084 K7ERI5 159 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 M0QZ92 97 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 CAND2O75155 1236 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 SGPL1O95470 568 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 RPL13P26373 211 aaKnown RBP11.4□□□□□ -0.58
RFC1-211ENST00000509084 GPC3P51654 580 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 STX17P56962 302 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 PTENP60484 403 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 FKBP3Q00688 224 aaKnown RBP11.4□□□□□ -0.58
RFC1-211ENST00000509084 MYBPC2Q14324 1141 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 NCAPHQ15003 741 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 PCBP1Q15365 356 aaKnown RBP eCLIP11.4□□□□□ -0.58
RFC1-211ENST00000509084 MAPK6Q16659 721 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 ZCWPW2Q504Y3 356 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 ZC2HC1CQ53FD0 456 aaPredicted RBP11.4□□□□□ -0.58
RFC1-211ENST00000509084 SRGAP1Q7Z6B7 1085 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 RPAINQ86UA6 219 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 KIAA0319LQ8IZA0 1049 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 CSGALNACT2Q8N6G5 542 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 SLC43A3Q8NBI5 491 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 ANKRD20A12PQ8NF67 263 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
RFC1-211ENST00000509084 NLRP4Q96MN2 994 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 CEP63Q96MT8 703 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 SCLT1Q96NL6 688 aa11.4□□□□□ -0.58
RFC1-211ENST00000509084 INO80BQ9C086 356 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms