RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 CDCA2Q69YH5 1023 aaPredicted RBP16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 HVCN1Q96D96 273 aa16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 ACCSQ96QU6 501 aa16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 DUSP9Q99956 384 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 HSD3B7Q9H2F3 369 aa16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 IKZF4Q9H2S9 585 aa16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 TMEM206Q9H813 350 aa16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 TYW1Q9NV66 732 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 DNAH12Q6ZR08 3092 aa16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 TRIP12Q14669 1992 aaPredicted RBP16.3■□□□□ 0.2
SNCAIP-211ENST00000509023 MRE11P49959 708 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 TPM4P67936 248 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 TAS1R3Q7RTX0 852 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 MAP4K3Q8IVH8 894 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 SYCP3Q8IZU3 236 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 PHLPP2Q6ZVD8 1323 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 PDXKO00764 312 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 TGFB1I1O43294 461 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 SCP2P22307 547 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 ABCD1P33897 745 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 HSP90AA4PQ58FG1 418 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 ZBTB8OSQ8IWT0 167 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 CSGALNACT2Q8N6G5 542 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 U2AF1L4Q8WU68 220 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 KCNN1Q92952 543 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 GBP3Q9H0R5 595 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 C2orf40Q9H1Z8 148 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 SAMSN1Q9NSI8 373 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 TRAF3IP3Q9Y228 551 aa16.29■□□□□ 0.2
SNCAIP-211ENST00000509023 SIP14410 1827 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 A0A087WZ62 844 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 K7ERI5 159 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 CALUO43852 315 aaPredicted RBP16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 SGPL1O95470 568 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 GPC3P51654 580 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 EFNA5P52803 228 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 NLRP11P59045 1033 aaKnown RBP16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 TMEM62Q0P6H9 643 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 STRN3Q13033 797 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 TAF2Q6P1X5 1199 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 FOXR2Q6PJQ5 311 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 NLRP7Q8WX94 980 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 SCLT1Q96NL6 688 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 FDXACB1Q9BRP7 624 aaPredicted RBP16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 CRISPLD2Q9H0B8 497 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 TMEM134Q9H6X4 195 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 PRDM10Q9NQV6 1147 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 EXOC7Q9UPT5 735 aa16.28■□□□□ 0.2
SNCAIP-211ENST00000509023 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 PTENP60484 403 aa16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 PTPN11Q06124 597 aaPredicted RBP16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 POU5F1BQ06416 359 aa16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 EDRF1Q3B7T1 1238 aa16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 HS2ST1Q7LGA3 356 aa16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 SRRTQ9BXP5 876 aaKnown RBP16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 NFKBIZQ9BYH8 718 aa16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 IFT122Q9HBG6 1241 aa16.27■□□□□ 0.2
SNCAIP-211ENST00000509023 CLIC2O15247 247 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 TFRCP02786 760 aaKnown RBP16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 PHKA2P46019 1235 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 FKBP3Q00688 224 aaKnown RBP16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 PTGISQ16647 500 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 KIZQ2M2Z5 673 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 SERINC5Q86VE9 423 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 ZNF410Q86VK4 478 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 CTAGE1Q96RT6 745 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 CCDC113Q9H0I3 377 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 AGPAT3Q9NRZ7 376 aa16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 TRMT13Q9NUP7 481 aaKnown RBP16.27■□□□□ 0.19
SNCAIP-211ENST00000509023 INO80B-WBP1J3KQ70 363 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 GPR32O75388 356 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 ATP1A3P13637 1013 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 ZNF18P17022 549 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 CDC42EP1Q00587 391 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 PLCB2Q00722 1185 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 LRRC55Q6ZSA7 311 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 SLC43A3Q8NBI5 491 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 NOC3LQ8WTT2 800 aaKnown RBP16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 BICD1Q96G01 975 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 INO80BQ9C086 356 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 ADAMTS10Q9H324 1103 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 THAP9Q9H5L6 903 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 MINDY3Q9H8M7 445 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 GINS2Q9Y248 185 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 TISP43B9A030 160 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 HNRNPDLO14979 420 aaKnown RBP16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 NR3C1P04150 777 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 NR2F2P24468 414 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 MBTD1Q05BQ5 628 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 MAPK6Q16659 721 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 IFNLR1Q8IU57 520 aaPredicted RBP16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 NME8Q8N427 588 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 GOLGA5Q8TBA6 731 aa16.26■□□□□ 0.19
SNCAIP-211ENST00000509023 WNT8BQ93098 351 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms