RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 PANK4Q9NVE7 773 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 PRMT7Q9NVM4 692 aaPredicted RBP11.31□□□□□ -0.6
HTT-204ENST00000508321 UMODL1Q5DID0 1318 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 CEP290O15078 2479 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 CCDC169A6NNP5 214 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 K7ENM7 598 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 TRAK2O60296 914 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 RPS6KA5O75582 802 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 BAIAP3O94812 1187 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 SRGAP2CP0DJJ0 459 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 GHRP10912 638 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 ACTN1P12814 892 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 AXLP30530 894 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 AFMP43652 599 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 PEX3P56589 373 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 MBTD1Q05BQ5 628 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 EHHADHQ08426 723 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
HTT-204ENST00000508321 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 TMEM62Q0P6H9 643 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 DPYDQ12882 1025 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 STRN3Q13033 797 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 PSMD2Q13200 908 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 LPIN1Q14693 890 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 MBTPS1Q14703 1052 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 MAPK6Q16659 721 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 PLEKHG4Q58EX7 1191 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 CNKSR3Q6P9H4 555 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 SFR1Q86XK3 245 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 BSNDQ8WZ55 320 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 SYAP1Q96A49 352 aaPredicted RBP11.3□□□□□ -0.6
HTT-204ENST00000508321 GSDMAQ96QA5 445 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 IFIH1Q9BYX4 1025 aaKnown RBP11.3□□□□□ -0.6
HTT-204ENST00000508321 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 MTIF3Q9H2K0 278 aaKnown RBP11.3□□□□□ -0.6
HTT-204ENST00000508321 CLSTN2Q9H4D0 955 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 IL23AQ9NPF7 189 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 EXOC1Q9NV70 894 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
HTT-204ENST00000508321 GINS2Q9Y248 185 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 CNTNAP2Q9UHC6 1331 aa11.3□□□□□ -0.6
HTT-204ENST00000508321 TET1Q8NFU7 2136 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 NPHP3-ACAD11A0A0J9YXS1 232 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 INO80B-WBP1J3KQ70 363 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 EIF3DO15371 548 aaKnown RBP eCLIP11.29□□□□□ -0.6
HTT-204ENST00000508321 NBNO60934 754 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 RHOBTB3O94955 611 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 KIF20AO95235 890 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 CCL23P55773 120 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 CACNB1Q02641 598 aaPredicted RBP11.29□□□□□ -0.6
HTT-204ENST00000508321 CUL4BQ13620 913 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 HERC4Q5GLZ8 1057 aaPredicted RBP11.29□□□□□ -0.6
HTT-204ENST00000508321 FAM26FQ5R3K3 315 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 APBB1IPQ7Z5R6 666 aaPredicted RBP11.29□□□□□ -0.6
HTT-204ENST00000508321 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 SPATA20Q8TB22 786 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 TMEM40Q8WWA1 233 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 STAMQ92783 540 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 SMARCE1Q969G3 411 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 PPP1R16BQ96T49 567 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 CCDC113Q9H0I3 377 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 BLZF1Q9H2G9 400 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 ZHX3Q9H4I2 956 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 MRPL44Q9H9J2 332 aaKnown RBP11.29□□□□□ -0.6
HTT-204ENST00000508321 ERVK-5Q9HDB9 667 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 CHST12Q9NRB3 414 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 AGPAT5Q9NUQ2 364 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 ZMYND8Q9ULU4 1186 aaPredicted RBP11.29□□□□□ -0.6
HTT-204ENST00000508321 ADGRA3Q8IWK6 1321 aa11.29□□□□□ -0.6
HTT-204ENST00000508321 TRIOBPQ9H2D6 2365 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 DENND3A2RUS2 1198 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 SLC16A4O15374 487 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 PPP1R37O75864 691 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 RPN1P04843 607 aaKnown RBP11.28□□□□□ -0.6
HTT-204ENST00000508321 PRKCBP05771 671 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 CSF2RAP15509 400 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 ITGB8P26012 769 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 PPP1R2P41236 205 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 RAB27AP51159 221 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 GTF2BQ00403 316 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
HTT-204ENST00000508321 KLHL40Q2TBA0 621 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 SKOR2Q2VWA4 1001 aaPredicted RBP11.28□□□□□ -0.6
HTT-204ENST00000508321 NT5DC1Q5TFE4 455 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 HAUS6Q7Z4H7 955 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 FAM228AQ86W67 206 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 GRAMD1CQ8IYS0 662 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 TRIML1Q8N9V2 468 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 GPT2Q8TD30 523 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 RSPH1Q8WYR4 309 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 BADQ92934 168 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 SCLYQ96I15 445 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
HTT-204ENST00000508321 FZD8Q9H461 694 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 C1orf112Q9NSG2 853 aa11.28□□□□□ -0.6
HTT-204ENST00000508321 PADI3Q9ULW8 664 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms