RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 HIDE1A8MVS5 230 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 MSH4O15457 936 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 ATF7P17544 494 aaPredicted RBP10.19□□□□□ -0.78
RPS3A-206ENST00000507485 CIITAP33076 1130 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 METAP2P50579 478 aaKnown RBP eCLIP10.19□□□□□ -0.782e-8■■□□□ 11.8
RPS3A-206ENST00000507485 RCAN1P53805 252 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 DRP2Q13474 957 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 DUSP6Q16828 381 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 PRR16Q569H4 304 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 CLLU1OSQ5K130 101 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 ZNF746Q6NUN9 644 aaPredicted RBP10.19□□□□□ -0.78
RPS3A-206ENST00000507485 REXO1Q8N1G1 1221 aaKnown RBP10.19□□□□□ -0.78
RPS3A-206ENST00000507485 PRSS33Q8NF86 280 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 TNPO1Q92973 898 aaKnown RBP10.19□□□□□ -0.78
RPS3A-206ENST00000507485 POP1Q99575 1024 aaKnown RBP10.19□□□□□ -0.78
RPS3A-206ENST00000507485 S1PR5Q9H228 398 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 TLE6Q9H808 572 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 TLR9Q9NR96 1032 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 C1orf112Q9NSG2 853 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 TMEM161AQ9NX61 479 aa10.19□□□□□ -0.78
RPS3A-206ENST00000507485 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
RPS3A-206ENST00000507485 GPR182O15218 404 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 PRPF3O43395 683 aaKnown RBP10.18□□□□□ -0.78
RPS3A-206ENST00000507485 CDC45O75419 566 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 CSDE1O75534 798 aaKnown RBP10.18□□□□□ -0.78
RPS3A-206ENST00000507485 STBD1O95210 358 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 MRE11P49959 708 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 NLRP11P59045 1033 aaKnown RBP10.18□□□□□ -0.78
RPS3A-206ENST00000507485 SPOUT1Q5T280 376 aaKnown RBP10.18□□□□□ -0.78
RPS3A-206ENST00000507485 PLPP4Q5VZY2 271 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 EFCAB12Q6NXP0 572 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 SYCE2Q6PIF2 218 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 CKAP2LQ8IYA6 745 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 THNSL1Q8IYQ7 743 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 METTL13Q8N6R0 699 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 MICAL1Q8TDZ2 1067 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 RPGRIP1Q96KN7 1286 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 JAKMIP1Q96N16 626 aaKnown RBP10.18□□□□□ -0.78
RPS3A-206ENST00000507485 CEP89Q96ST8 783 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 SH2D3AQ9BRG2 576 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 APOL5Q9BWW9 433 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 AGXT2Q9BYV1 514 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 UPF3BQ9BZI7 483 aaKnown RBP10.18□□□□□ -0.78
RPS3A-206ENST00000507485 ATP6V0A4Q9HBG4 840 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 NCOA5Q9HCD5 579 aaKnown RBP10.18□□□□□ -0.78
RPS3A-206ENST00000507485 TBC1D22BQ9NU19 505 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 VPS54Q9P1Q0 977 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 PCDHB12Q9Y5F1 795 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 PCDHA10Q9Y5I2 948 aa10.18□□□□□ -0.78
RPS3A-206ENST00000507485 PSAPP07602 524 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 HSPA4P34932 840 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 GPC3P51654 580 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 ZXDAP98168 799 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 SETQ01105 290 aaPredicted RBP10.17□□□□□ -0.78
RPS3A-206ENST00000507485 PRKCEQ02156 737 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 UBE3AQ05086 875 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 TARBP2Q15633 366 aaKnown RBP10.17□□□□□ -0.78
RPS3A-206ENST00000507485 ECHDC2Q86YB7 292 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 SMAP1Q8IYB5 467 aaPredicted RBP10.17□□□□□ -0.78
RPS3A-206ENST00000507485 MRPS27Q92552 414 aaKnown RBP10.17□□□□□ -0.78
RPS3A-206ENST00000507485 PHF7Q9BWX1 381 aaPredicted RBP10.17□□□□□ -0.78
RPS3A-206ENST00000507485 TMEM117Q9H0C3 514 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 GLT8D2Q9H1C3 349 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 UNC45AQ9H3U1 944 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 ELAC1Q9H777 363 aaKnown RBP10.17□□□□□ -0.78
RPS3A-206ENST00000507485 C6orf50Q9HD87 102 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 TMEM221A6NGB7 291 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 M0R296 226 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 CHMP2AO43633 222 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 DTNBO60941 627 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 CD46P15529 392 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 LAG3P18627 525 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 SP100P23497 879 aaPredicted RBP10.17□□□□□ -0.78
RPS3A-206ENST00000507485 PLCB3Q01970 1234 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 KRT32Q14532 448 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 NPY5RQ15761 445 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 ANKRD54Q6NXT1 300 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 LLGL2Q6P1M3 1020 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 KCNT2Q6UVM3 1135 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 B3GNT9Q6UX72 402 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 BMP8AQ7Z5Y6 402 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 TMEM173Q86WV6 379 aaPredicted RBP10.17□□□□□ -0.78
RPS3A-206ENST00000507485 ZSCAN1Q8NBB4 408 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 SLC5A5Q92911 643 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 PPP2R3CQ969Q6 453 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 ASIC4Q96FT7 647 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 DISC1Q9NRI5 854 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 AKT3Q9Y243 479 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 ZDBF2Q9HCK1 2354 aa10.17□□□□□ -0.78
RPS3A-206ENST00000507485 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
RPS3A-206ENST00000507485 WDR64B1ANS9 1081 aa10.16□□□□□ -0.78
RPS3A-206ENST00000507485 NT5C1B-RDH14C9J2C7 533 aa10.16□□□□□ -0.78
RPS3A-206ENST00000507485 B4GALT3O60512 393 aa10.16□□□□□ -0.78
RPS3A-206ENST00000507485 PSMD10O75832 226 aa10.16□□□□□ -0.78
RPS3A-206ENST00000507485 TDP2O95551 362 aa10.16□□□□□ -0.78
RPS3A-206ENST00000507485 PDGFBP01127 241 aaPredicted RBP10.16□□□□□ -0.78
RPS3A-206ENST00000507485 DARSP14868 501 aaKnown RBP10.16□□□□□ -0.78
RPS3A-206ENST00000507485 IFNAR1P17181 557 aa10.16□□□□□ -0.78
RPS3A-206ENST00000507485 RPS6KB1P23443 525 aa10.16□□□□□ -0.78
RPS3A-206ENST00000507485 EIF4BP23588 611 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms