RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 POTEJP0CG39 1038 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 BTDP43251 543 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 KIF22Q14807 665 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 RNF43Q68DV7 783 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 CHADLQ6NUI6 762 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 POTEEQ6S8J3 1075 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 CKAP2Q8WWK9 683 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 VTI1AQ96AJ9 217 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 GPR88Q9GZN0 384 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 JAG2Q9Y219 1238 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 MTA2O94776 668 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 KRT13P13646 458 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 GAP43P17677 238 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 PDE6BP35913 854 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 PSMC2P35998 433 aaKnown RBP19.13■□□□□ 0.65
NUP54-205ENST00000507257 CASP4P49662 377 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 ACVR2BQ13705 512 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 DRAP1Q14919 205 aaPredicted RBP19.13■□□□□ 0.65
NUP54-205ENST00000507257 GJB7Q6PEY0 223 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 EP400NLQ6ZTU2 488 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 ADGRF4Q8IZF3 695 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 C12orf50Q8NA57 414 aaPredicted RBP19.13■□□□□ 0.65
NUP54-205ENST00000507257 SLCO2A1Q92959 643 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 GRAMD1AQ96CP6 724 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 C18orf8Q96DM3 657 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 ARHGEF26Q96DR7 871 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 ZSWIM1Q9BR11 485 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 ZHX3Q9H4I2 956 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 PSTPIP2Q9H939 334 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 USP40Q9NVE5 1235 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 DNAJC12Q9UKB3 198 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 ALG6Q9Y672 507 aa19.13■□□□□ 0.65
NUP54-205ENST00000507257 ZBTB5O15062 677 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 TCEA3O75764 348 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 KRT16P08779 473 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 MSH2P43246 934 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 LACTBP83111 547 aaPredicted RBP19.12■□□□□ 0.65
NUP54-205ENST00000507257 BLMHQ13867 455 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 CMPK2Q5EBM0 449 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 GPATCH4Q5T3I0 446 aaKnown RBP19.12■□□□□ 0.65
NUP54-205ENST00000507257 SPATA21Q7Z572 469 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 CATSPER3Q86XQ3 398 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 TRIM7Q9C029 511 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 COG5Q9UP83 839 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 PASKQ96RG2 1323 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 DIAPH2O60879 1101 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 TTLL1O95922 423 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 TNFAIP3P21580 790 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 RFC4P35249 363 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 IFNAR2P48551 515 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 FMO5P49326 533 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 ATP11AP98196 1134 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 CCDC137Q6PK04 289 aaKnown RBP19.12■□□□□ 0.65
NUP54-205ENST00000507257 POTEGQ6S5H5 508 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 ZNF804AQ7Z570 1209 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 CRYGNQ8WXF5 182 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 GJA10Q969M2 543 aa19.12■□□□□ 0.65
NUP54-205ENST00000507257 UBE4BO95155 1302 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 TCP11X1B4DZS4 312 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 E7ENQ6 273 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 ATP2A2P16615 1042 aaKnown RBP19.11■□□□□ 0.65
NUP54-205ENST00000507257 COPB2P35606 906 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 PEX5P50542 639 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 RHBDL3P58872 404 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 AP3B2Q13367 1082 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 ZNF211Q13398 564 aaPredicted RBP19.11■□□□□ 0.65
NUP54-205ENST00000507257 GRIK5Q16478 980 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 SEL1L2Q5TEA6 688 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 MIS18BP1Q6P0N0 1132 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 TTC27Q6P3X3 843 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 FAM186BQ8IYM0 893 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 TEX9Q8N6V9 391 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 ETNPPLQ8TBG4 499 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 DYDC1Q8WWB3 177 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 SPDL1Q96EA4 605 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 RAB3IPQ96QF0 476 aaPredicted RBP19.11■□□□□ 0.65
NUP54-205ENST00000507257 THAP2Q9H0W7 228 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 WNT8AQ9H1J5 351 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 FGFR1OP2Q9NVK5 253 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 WHRNQ9P202 907 aa19.11■□□□□ 0.65
NUP54-205ENST00000507257 TMEM120BA0PK00 339 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 SMIM23A6NLE4 172 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 TGFB1I1O43294 461 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 ATP5HO75947 161 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 SPATA31C1P0DKV0 1188 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 ABCB4P21439 1286 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 FGFR4P22455 802 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 TM4SF1P30408 202 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 COILP38432 576 aaPredicted RBP19.1■□□□□ 0.65
NUP54-205ENST00000507257 MAP2K1Q02750 393 aaPredicted RBP19.1■□□□□ 0.65
NUP54-205ENST00000507257 GABPAQ06546 454 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 PARP6Q2NL67 630 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 CAPRIN2Q6IMN6 1127 aaKnown RBP19.1■□□□□ 0.65
NUP54-205ENST00000507257 VSTM1Q6UX27 236 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 APLFQ8IW19 511 aaPredicted RBP19.1■□□□□ 0.65
NUP54-205ENST00000507257 ARHGEF2Q92974 986 aaKnown RBP19.1■□□□□ 0.65
NUP54-205ENST00000507257 APEX2Q9UBZ4 518 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 MTUS1Q9ULD2 1270 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 ABLIM1O14639 778 aa19.1■□□□□ 0.65
NUP54-205ENST00000507257 Q4G0T1 1027 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms