RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 TLL1O43897 1013 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 NAMPTP43490 491 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 HTRA4P83105 476 aaPredicted RBP20.11■□□□□ 0.81
NPHP4-210ENST00000506941 CACNB1Q02641 598 aaPredicted RBP20.11■□□□□ 0.81
NPHP4-210ENST00000506941 AMHR2Q16671 573 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 RESP18Q5W5W9 173 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 TIFAQ96CG3 184 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 ZBED2Q9BTP6 218 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 KIFC3Q9BVG8 833 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 TIPINQ9BVW5 301 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 AGPAT5Q9NUQ2 364 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 KCND2Q9NZV8 630 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 MSRAQ9UJ68 235 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 PIN4Q9Y237 131 aaKnown RBP20.11■□□□□ 0.81
NPHP4-210ENST00000506941 REV3LO60673 3130 aa20.11■□□□□ 0.81
NPHP4-210ENST00000506941 TDRD15B5MCY1 1934 aaKnown RBP20.1■□□□□ 0.81
NPHP4-210ENST00000506941 SFI1A8K8P3 1242 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 INO80B-WBP1J3KQ70 363 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 TSPAN1O60635 241 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 CA3P07451 260 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 HOXA11P31270 313 aaPredicted RBP20.1■□□□□ 0.81
NPHP4-210ENST00000506941 SARSP49591 514 aaKnown RBP20.1■□□□□ 0.81
NPHP4-210ENST00000506941 E2F4Q16254 413 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 GPR153Q6NV75 609 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 CCDC73Q6ZRK6 1079 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 FAM43BQ6ZT52 329 aaPredicted RBP20.1■□□□□ 0.81
NPHP4-210ENST00000506941 SLC24A5Q71RS6 500 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 Q7L0L9 218 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 DRC1Q96MC2 740 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 RAD9AQ99638 391 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 REEP2Q9BRK0 252 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 TTYH1Q9H313 450 aaPredicted RBP20.1■□□□□ 0.81
NPHP4-210ENST00000506941 RC3H2Q9HBD1 1191 aaKnown RBP20.1■□□□□ 0.81
NPHP4-210ENST00000506941 GDPD2Q9HCC8 539 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 TSHZ2Q9NRE2 1034 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 C1orf112Q9NSG2 853 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 CIZ1Q9ULV3 898 aaPredicted RBP20.1■□□□□ 0.81
NPHP4-210ENST00000506941 ATG2AQ2TAZ0 1938 aa20.1■□□□□ 0.81
NPHP4-210ENST00000506941 EDN1P05305 212 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 ZSCAN20P17040 1043 aaPredicted RBP20.09■□□□□ 0.81
NPHP4-210ENST00000506941 IBSPP21815 317 aaPredicted RBP20.09■□□□□ 0.81
NPHP4-210ENST00000506941 STAT6P42226 847 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 NPTX2P47972 431 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 PEX3P56589 373 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 FAM189BP81408 668 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 PPP2R5AQ15172 486 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 NPAS4Q8IUM7 802 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 IFT74Q96LB3 600 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 SCAND2PQ9GZW5 306 aaPredicted RBP20.09■□□□□ 0.81
NPHP4-210ENST00000506941 CCDC113Q9H0I3 377 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 CHST12Q9NRB3 414 aa20.09■□□□□ 0.81
NPHP4-210ENST00000506941 EYSQ5T1H1 3165 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 B4GALT5O43286 388 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 GATMP50440 423 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 GIT2Q14161 759 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 SPRED2Q7Z698 418 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 ZBTB8OSQ8IWT0 167 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 DEPTORQ8TB45 409 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 CPB2Q96IY4 423 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 RBM19Q9Y4C8 960 aaKnown RBP20.08■□□□□ 0.81
NPHP4-210ENST00000506941 INSL6Q9Y581 213 aa20.08■□□□□ 0.81
NPHP4-210ENST00000506941 MYMKA6NI61 221 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 TTLL13PA6NNM8 815 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 DGKIO75912 1065 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 ERLIN2O94905 339 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 ATF7P17544 494 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-210ENST00000506941 ARF4P18085 180 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-210ENST00000506941 DMP1Q13316 513 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-210ENST00000506941 PCBP1Q15365 356 aaKnown RBP eCLIP20.07■□□□□ 0.8
NPHP4-210ENST00000506941 ADALQ6DHV7 355 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 TWF2Q6IBS0 349 aaKnown RBP20.07■□□□□ 0.8
NPHP4-210ENST00000506941 ECHDC2Q86YB7 292 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 SP7Q8TDD2 431 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-210ENST00000506941 ZNF689Q96CS4 500 aaPredicted RBP20.07■□□□□ 0.8
NPHP4-210ENST00000506941 YME1L1Q96TA2 773 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 TRAIPQ9BWF2 469 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 C2orf40Q9H1Z8 148 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 FZD8Q9H461 694 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 DACT1Q9NYF0 836 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 ODF2LQ9ULJ1 636 aa20.07■□□□□ 0.8
NPHP4-210ENST00000506941 TMEM265A0A087WTH1 108 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 A0A0U1RQF3 1178 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 CCDC169A6NNP5 214 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 CITO14578 2027 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 PLS3P13797 630 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 ZNF131P52739 623 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 TAP1Q03518 808 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 FAM187BQ17R55 369 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 UBXN11Q5T124 520 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 ZNF697Q5TEC3 545 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 PPP2R2DQ66LE6 453 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 SV2BQ7L1I2 683 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 TAS1R3Q7RTX0 852 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 ZNF598Q86UK7 904 aaKnown RBP20.06■□□□□ 0.8
NPHP4-210ENST00000506941 DHX58Q96C10 678 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 FAM161BQ96MY7 647 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 ZNF576Q9H609 170 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 C17orf75Q9HAS0 396 aa20.06■□□□□ 0.8
NPHP4-210ENST00000506941 PLXNA4Q9HCM2 1894 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms