RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ALG13Q9NP73 1137 aaKnown RBP17.25■□□□□ 0.35
MED28-204ENST00000506409 AAASQ9NRG9 546 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 FAM105AQ9NUU6 356 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
MED28-204ENST00000506409 TYW1Q9NV66 732 aaKnown RBP17.25■□□□□ 0.35
MED28-204ENST00000506409 HCSTQ9UBK5 93 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 KIAA1671Q9BY89 1806 aa17.25■□□□□ 0.35
MED28-204ENST00000506409 VWA3AA6NCI4 1184 aa17.24■□□□□ 0.35
MED28-204ENST00000506409 CYP11B2P19099 503 aa17.24■□□□□ 0.35
MED28-204ENST00000506409 CLLU1OSQ5K130 101 aa17.24■□□□□ 0.35
MED28-204ENST00000506409 ARL6IP4Q66PJ3 421 aaKnown RBP17.24■□□□□ 0.35
MED28-204ENST00000506409 IFNLR1Q8IU57 520 aaPredicted RBP17.24■□□□□ 0.35
MED28-204ENST00000506409 KLHL23Q8NBE8 558 aa17.24■□□□□ 0.35
MED28-204ENST00000506409 NFKBIZQ9BYH8 718 aa17.24■□□□□ 0.35
MED28-204ENST00000506409 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
MED28-204ENST00000506409 PLAGL2Q9UPG8 496 aa17.24■□□□□ 0.35
MED28-204ENST00000506409 PCDHB12Q9Y5F1 795 aa17.24■□□□□ 0.35
MED28-204ENST00000506409 LRRIQ4A6NIV6 560 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 TSPAN1O60635 241 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 ITGB1P05556 798 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 LAG3P18627 525 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 SYT1P21579 422 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 HOXA11P31270 313 aaPredicted RBP17.23■□□□□ 0.35
MED28-204ENST00000506409 MRPS5P82675 430 aaKnown RBP17.23■□□□□ 0.35
MED28-204ENST00000506409 MBTD1Q05BQ5 628 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 NCBP1Q09161 790 aaKnown RBP17.23■□□□□ 0.35
MED28-204ENST00000506409 LONRF3Q496Y0 759 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 HELQQ8TDG4 1101 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 LPPQ93052 612 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 HLA-CQ95604 372 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 SNX21Q969T3 373 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 MMTAG2Q9BU76 263 aaKnown RBP17.23■□□□□ 0.35
MED28-204ENST00000506409 NSUN3Q9H649 340 aaKnown RBP17.23■□□□□ 0.35
MED28-204ENST00000506409 CWH43Q9H720 699 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 COG5Q9UP83 839 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 DNM3Q9UQ16 869 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
MED28-204ENST00000506409 ZNF623O75123 536 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 CSPG5O95196 566 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 BMP15O95972 392 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 AXLP30530 894 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 TFF2Q03403 129 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 ZRSR1Q15695 479 aaKnown RBP17.22■□□□□ 0.35
MED28-204ENST00000506409 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 TJAP1Q5JTD0 557 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 NOTUMQ6P988 496 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 GLB1LQ6UWU2 654 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 LRRC55Q6ZSA7 311 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 COLGALT1Q8NBJ5 622 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 SPPL3Q8TCT6 385 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 RSPH1Q8WYR4 309 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 PGBD4Q96DM1 585 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 ASB2Q96Q27 587 aa17.22■□□□□ 0.35
MED28-204ENST00000506409 MRPL9Q9BYD2 267 aaKnown RBP17.22■□□□□ 0.35
MED28-204ENST00000506409 E9PMD0 336 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 DLL1O00548 723 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 EYA4O95677 639 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 SF3A1Q15459 793 aaKnown RBP17.21■□□□□ 0.35
MED28-204ENST00000506409 AAK1Q2M2I8 961 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 TCEAL5Q5H9L2 206 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 UBXN11Q5T124 520 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 HSCBQ8IWL3 235 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 ZBTB8OSQ8IWT0 167 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 THNSL1Q8IYQ7 743 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 CCDC51Q96ER9 411 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 CPB2Q96IY4 423 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 MYO7AQ13402 2215 aa17.21■□□□□ 0.35
MED28-204ENST00000506409 MEIS3P2A8K0S8 358 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 FGF18O76093 207 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 DNAJB1P25685 340 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 NAMPTP43490 491 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 CAMK1Q14012 370 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 PPP2R5AQ15172 486 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 AMHR2Q16671 573 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 CDCA2Q69YH5 1023 aaPredicted RBP17.2■□□□□ 0.34
MED28-204ENST00000506409 POF1BQ8WVV4 589 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 BSNDQ8WZ55 320 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 SYMPKQ92797 1274 aaKnown RBP17.2■□□□□ 0.34
MED28-204ENST00000506409 KIFAP3Q92845 792 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 CDK5RAP3Q96JB5 506 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 AK8Q96MA6 479 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 ZNF558Q96NG5 402 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 COL25A1Q9BXS0 654 aaPredicted RBP17.2■□□□□ 0.34
MED28-204ENST00000506409 C2orf40Q9H1Z8 148 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 INPP5FQ9Y2H2 1132 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 VCANP13611 3396 aa17.2■□□□□ 0.34
MED28-204ENST00000506409 XIRP2A4UGR9 3374 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 B4GALT5O43286 388 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 ARF4P18085 180 aaPredicted RBP17.19■□□□□ 0.34
MED28-204ENST00000506409 PPM1AP35813 382 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 UBE3AQ05086 875 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 RESTQ13127 1097 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 NOMO2Q5JPE7 1267 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 HYIQ5T013 277 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 KCNT2Q6UVM3 1135 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 KCNK18Q7Z418 384 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
MED28-204ENST00000506409 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 DEPTORQ8TB45 409 aa17.19■□□□□ 0.34
MED28-204ENST00000506409 IFT74Q96LB3 600 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms