RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 PCDHB13Q9Y5F0 798 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 PHLPP2Q6ZVD8 1323 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 ADGRA3Q8IWK6 1321 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 GBF1Q92538 1859 aa7.94□□□□□ -1.14
NUP54-204ENST00000506098 SLC16A4O15374 487 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 CAND2O75155 1236 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 GPR32O75388 356 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 KIF20AO95235 890 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 MYCP01106 439 aaPredicted RBP7.93□□□□□ -1.14
NUP54-204ENST00000506098 CD4P01730 458 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 MYBP10242 640 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 HOXD13P35453 343 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 GPC3P51654 580 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 EFNA5P52803 228 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 CHMP4BP1P59074 171 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 PTENP60484 403 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 RBL2Q08999 1139 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 STIM1Q13586 685 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 TFDP1Q14186 410 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 PTGISQ16647 500 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 NFIL3Q16649 462 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 FAM187BQ17R55 369 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 TRIM71Q2Q1W2 868 aaKnown RBP7.93□□□□□ -1.14
NUP54-204ENST00000506098 ANO6Q4KMQ2 910 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 L1TD1Q5T7N2 865 aaKnown RBP7.93□□□□□ -1.14
NUP54-204ENST00000506098 C11orf57Q6ZUT1 292 aaPredicted RBP7.93□□□□□ -1.14
NUP54-204ENST00000506098 TAS1R3Q7RTX0 852 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 SRGAP1Q7Z6B7 1085 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 RHPN2Q8IUC4 686 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 KSR1Q8IVT5 923 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 FAM126BQ8IXS8 530 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 SMYD4Q8IYR2 804 aaPredicted RBP7.93□□□□□ -1.14
NUP54-204ENST00000506098 MYOCDQ8IZQ8 938 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 GLIS3Q8NEA6 775 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 PPP1R13LQ8WUF5 828 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 TMEM174Q8WUU8 243 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 SCFD1Q8WVM8 642 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 DNAJB3Q8WWF6 145 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 VTI1AQ96AJ9 217 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 TOX2Q96NM4 488 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 MAP7D2Q96T17 732 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 CCDC113Q9H0I3 377 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 DNAJC25Q9H1X3 360 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 C2orf40Q9H1Z8 148 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 ADAMTS10Q9H324 1103 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 KCTD10Q9H3F6 313 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 TSPY26PQ9H489 355 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 IFT122Q9HBG6 1241 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 TBC1D7Q9P0N9 293 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 AKT3Q9Y243 479 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 MROH7Q68CQ1 1323 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 SCN1AP35498 2009 aa7.93□□□□□ -1.14
NUP54-204ENST00000506098 NLRC5Q86WI3 1866 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 MYH10P35580 1976 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 A0A087WZ62 844 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 LRRIQ4A6NIV6 560 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 CCDC169A6NNP5 214 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 K7ENM7 598 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 K7ERI5 159 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 PDXKO00764 312 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 PSMA7O14818 248 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 IKBKBO14920 756 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 B4GALT4O60513 344 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 PRPF6O94906 941 aaKnown RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 GCNT3O95395 438 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 PIGRP01833 764 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 VTNP04004 478 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 CCNE1P24864 410 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 NLRP11P59045 1033 aaKnown RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 SNRPFP62306 86 aaKnown RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 MGAT3Q09327 533 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 IQCB1Q15051 598 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 PCBP1Q15365 356 aaKnown RBP eCLIP7.92□□□□□ -1.14
NUP54-204ENST00000506098 KNOP1Q1ED39 458 aaKnown RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 ZC2HC1CQ53FD0 456 aaPredicted RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 FAM47CQ5HY64 1035 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 FAM26DQ5JW98 314 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 ANKRD33Q7Z3H0 272 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 UBE2Q1Q7Z7E8 422 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 RSPH3Q86UC2 560 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 GAS2L3Q86XJ1 694 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 MAP4K3Q8IVH8 894 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 RNF149Q8NC42 400 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 DEPTORQ8TB45 409 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 ENOX1Q8TC92 643 aaKnown RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 DHX38Q92620 1227 aaKnown RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 P2RX5Q93086 422 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 WNT8BQ93098 351 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 ACCSQ96QU6 501 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 MED15Q96RN5 788 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 FDXACB1Q9BRP7 624 aaPredicted RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 SENP6Q9GZR1 1112 aaPredicted RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 NAT10Q9H0A0 1025 aaKnown RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 SEMA6BQ9H3T3 888 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 FZD8Q9H461 694 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 TMEM206Q9H813 350 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 CGNQ9P2M7 1197 aaKnown RBP7.92□□□□□ -1.14
NUP54-204ENST00000506098 RWDD2AQ9UIY3 292 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 TBX20Q9UMR3 447 aa7.92□□□□□ -1.14
NUP54-204ENST00000506098 TRAF3IP3Q9Y228 551 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms