RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 MRPL18Q9H0U6 180 aaKnown RBP5.61□□□□□ -1.51
CDH9-203ENST00000505045 MRPL11Q9Y3B7 192 aaKnown RBP5.61□□□□□ -1.51
CDH9-203ENST00000505045 PPME1Q9Y570 386 aa5.61□□□□□ -1.51
CDH9-203ENST00000505045 BDP1A6H8Y1 2624 aa5.61□□□□□ -1.51
CDH9-203ENST00000505045 TRIOO75962 3097 aa5.61□□□□□ -1.51
CDH9-203ENST00000505045 PRRC2BQ5JSZ5 2229 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 ATG2AQ2TAZ0 1938 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 WDR81Q562E7 1941 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 LOXHD1Q8IVV2 1947 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 ERICH2A1L162 156 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 A6NHS1 94 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 MEIS2O14770 477 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 CABYRO75952 493 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 DDAH1O94760 285 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 MYCLP12524 364 aaPredicted RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 CDC27P30260 824 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 DNM1Q05193 864 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 TTLL4Q14679 1199 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 SART3Q15020 963 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 STXBP2Q15833 593 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 TCTN1Q2MV58 587 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 FAM47CQ5HY64 1035 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 CEP135Q66GS9 1140 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 USP17L6PQ6QN14 398 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 OTOP2Q7RTS6 562 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 ZNF438Q7Z4V0 828 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 CATIPQ7Z7H3 387 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 MCF2L2Q86YR7 1114 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 MYLIPQ8WY64 445 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 MTG1Q9BT17 334 aaPredicted RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 SPZ1Q9BXG8 430 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 AKTIPQ9H8T0 292 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 DDX41Q9UJV9 622 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 PNMA2Q9UL42 364 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 BRPF3Q9ULD4 1205 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 STXBP5LQ9Y2K9 1186 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 NCOR1O75376 2440 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 PNMA6FA0A0J9YX94 578 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 ADAMTS3O15072 1205 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 TLR3O15455 904 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 EIF3JO75822 258 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 SMNDC1O75940 238 aaKnown RBP eCLIP5.6□□□□□ -1.51
CDH9-203ENST00000505045 F2P00734 622 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 GH1P01241 217 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 MYOGP15173 224 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 MCM5P33992 734 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 SMAD3P84022 425 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 ZNF200P98182 395 aaPredicted RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 MTMR3Q13615 1198 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 GPNMBQ14956 572 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 UBE2SQ16763 222 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 ALKBH2Q6NS38 261 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 APOA5Q6Q788 366 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 TMTC3Q6ZXV5 915 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 SPRED2Q7Z698 418 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 VSIG10LQ86VR7 867 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 USP38Q8NB14 1042 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 CTCFLQ8NI51 663 aaPredicted RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 SPACA7Q96KW9 195 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 IWS1Q96ST2 819 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 POP1Q99575 1024 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 CDX2Q99626 313 aaPredicted RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 IL23AQ9NPF7 189 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 YBX2Q9Y2T7 364 aaKnown RBP5.6□□□□□ -1.51
CDH9-203ENST00000505045 MRVI1Q9Y6F6 885 aa5.6□□□□□ -1.51
CDH9-203ENST00000505045 KAT6AQ92794 2004 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 GCOM1H8Y6P7 765 aaPredicted RBP5.59□□□□□ -1.51
CDH9-203ENST00000505045 LINC01387J3KSC0 135 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 NKRFO15226 690 aaKnown RBP eCLIP5.59□□□□□ -1.51
CDH9-203ENST00000505045 ZEB2O60315 1214 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 FZD6O60353 706 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 CDC45O75419 566 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 ALX3O95076 343 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 GGPS1O95749 300 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 POLR2MP0CAP2 368 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 ACPPP15309 386 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 LIFRP42702 1097 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 RABGGTBP53611 331 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 PPIGQ13427 754 aaKnown RBP eCLIP5.59□□□□□ -1.51
CDH9-203ENST00000505045 WWC2Q6AWC2 1192 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 NFRKBQ6P4R8 1299 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 PSRC1Q6PGN9 363 aaPredicted RBP5.59□□□□□ -1.51
CDH9-203ENST00000505045 CASC1Q6TDU7 716 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 NFXL1Q6ZNB6 911 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 TMCO2Q7Z6W1 182 aaPredicted RBP5.59□□□□□ -1.51
CDH9-203ENST00000505045 DEFB128Q7Z7B8 93 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 SGMS1Q86VZ5 419 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 TMEM199Q8N511 208 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 PPTC7Q8NI37 304 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 PGBD1Q96JS3 809 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 TMEM87BQ96K49 555 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 INPP4AQ96PE3 977 aaPredicted RBP5.59□□□□□ -1.51
CDH9-203ENST00000505045 OSBPL7Q9BZF2 842 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 KCNK4Q9NYG8 393 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 KANSL3Q9P2N6 904 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 HDAC6Q9UBN7 1215 aa5.59□□□□□ -1.51
CDH9-203ENST00000505045 POLIQ9UNA4 740 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms