RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 KCTD2Q14681 263 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 C1orf220Q5T0J3 134 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 PAPD7Q5XG87 772 aaKnown RBP23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 GJB7Q6PEY0 223 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 TXLNBQ8N3L3 684 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 PDCL2Q8N4E4 241 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 KCNN1Q92952 543 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 POLR3FQ9H1D9 316 aaPredicted RBP23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 DHX33Q9H6R0 707 aaKnown RBP23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 ARHGAP28Q9P2N2 729 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 DAAM1Q9Y4D1 1078 aa23.26■■□□□ 1.31
UBE2D3-216ENST00000503742 MACROD2A1Z1Q3 448 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 POTEJP0CG39 1038 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 EMC2Q15006 297 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 METTL7BQ6UX53 244 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 TRAPPC11Q7Z392 1133 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 SRGAP1Q7Z6B7 1085 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 SHCBP1Q8NEM2 672 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 LMO3Q8TAP4 145 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 PLEKHO2Q8TD55 490 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 AFAP1L1Q8TED9 768 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 INTS2Q9H0H0 1204 aaKnown RBP23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 A0A087X0T9 212 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 P4HA2O15460 535 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 FAM228BP0C875 321 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 PTK2Q05397 1052 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 SLC39A4Q6P5W5 647 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 CEP112Q8N8E3 955 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 MORC4Q8TE76 937 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 IFT74Q96LB3 600 aa23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 DDX41Q9UJV9 622 aaKnown RBP23.25■■□□□ 1.31
UBE2D3-216ENST00000503742 ANO9A1A5B4 782 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 GGPS1O95749 300 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 PPP3CAQ08209 521 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 WHAMMP3Q1A5X7 153 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 EEPD1Q7L9B9 569 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 TAS1R3Q7RTX0 852 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 ZNF571Q7Z3V5 609 aaPredicted RBP23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 STK33Q9BYT3 514 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 ADAMTS1Q9UHI8 967 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 KCNG1Q9UIX4 513 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 EMSYQ7Z589 1322 aa23.24■■□□□ 1.31
UBE2D3-216ENST00000503742 PMM2O15305 246 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 N4BP1O75113 896 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 ARIH2O95376 493 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 ATP1A1P05023 1023 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 ADRB2P07550 413 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 ANXA13P27216 316 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 POLGP54098 1239 aaPredicted RBP23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 TARBP2Q15633 366 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 LY6KQ17RY6 165 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 KCNV1Q6PIU1 500 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 TRIM58Q8NG06 486 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 GTF3C2Q8WUA4 911 aaPredicted RBP23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 SEPT1Q8WYJ6 367 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 FBXL18Q96ME1 805 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 MLXIPQ9HAP2 919 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 APEX2Q9UBZ4 518 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 PNMA3Q9UL41 463 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 CLEC11AQ9Y240 323 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 LOC102724159A0A0B4J2E5 919 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 H0YCG3 227 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 ENC1O14682 589 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 ABCD1P33897 745 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 PWP2Q15269 919 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 MAP1SQ66K74 1059 aaPredicted RBP23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 PORCNQ9H237 461 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 LUC7LQ9NQ29 371 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 SALL4Q9UJQ4 1053 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 DNAJC12Q9UKB3 198 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 CAPN6Q9Y6Q1 641 aa23.23■■□□□ 1.31
UBE2D3-216ENST00000503742 TACC1O75410 805 aa23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 CYP2C8P10632 490 aa23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 STAT1P42224 750 aa23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 STAT5BP51692 787 aa23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 ENOX2Q16206 610 aaKnown RBP23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 BRDTQ58F21 947 aaPredicted RBP23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 FAM160B1Q5W0V3 765 aa23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 GPR88Q9GZN0 384 aa23.22■■□□□ 1.31
UBE2D3-216ENST00000503742 GOLGA8IPA6NC78 632 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 GOLGA8JA6NMD2 632 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 F8VZ95 297 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 MOCS3O95396 460 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 FERP16591 822 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 TCF7P36402 384 aaPredicted RBP23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 ARL2P36404 184 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 SNRNP35Q16560 246 aaKnown RBP23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 EPC2Q52LR7 807 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 CBWD2Q8IUF1 395 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 RNF10Q8N5U6 811 aaKnown RBP23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 MS4A4AQ96JQ5 239 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 NRBP2Q9NSY0 501 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 HDAC6Q9UBN7 1215 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 NENFQ9UMX5 172 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 SLC45A1Q9Y2W3 748 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 MCM3APO60318 1980 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 MYH10P35580 1976 aa23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 TFRCP02786 760 aaKnown RBP23.21■■□□□ 1.31
UBE2D3-216ENST00000503742 H2AFXP16104 143 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms