RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 PDE12Q6L8Q7 609 aaKnown RBP21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 CCDC43Q96MW1 224 aaKnown RBP21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 TCF25Q9BQ70 676 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 TRAIPQ9BWF2 469 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 AGPAT5Q9NUQ2 364 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 SPG21Q9NZD8 308 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 PRKAG3Q9UGI9 489 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 BARX2Q9UMQ3 279 aaPredicted RBP21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 LZTS1Q9Y250 596 aa21.69■■□□□ 1.06
UBE2D3-215ENST00000503418 FSCN2O14926 492 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 GLP2RO95838 553 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 RAB27AP51159 221 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 ZP2Q05996 745 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 SMAD2Q15796 467 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 C8orf34Q49A92 452 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 SRGAP1Q7Z6B7 1085 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 FERMT3Q86UX7 667 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 ADHFE1Q8IWW8 467 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 RNF149Q8NC42 400 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 MSLNLQ96KJ4 702 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 MTMR9Q96QG7 549 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 LLPHQ9BRT6 129 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 TMEM60Q9H2L4 133 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 MINDY3Q9H8M7 445 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 CLEC1BQ9P126 229 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 INPP5FQ9Y2H2 1132 aa21.68■■□□□ 1.06
UBE2D3-215ENST00000503418 POTEMA6NI47 508 aa21.67■■□□□ 1.06
UBE2D3-215ENST00000503418 ASAP2O43150 1006 aa21.67■■□□□ 1.06
UBE2D3-215ENST00000503418 GLB1LQ6UWU2 654 aa21.67■■□□□ 1.06
UBE2D3-215ENST00000503418 ZSCAN31Q96LW9 406 aaPredicted RBP21.67■■□□□ 1.06
UBE2D3-215ENST00000503418 HSD17B14Q9BPX1 270 aa21.67■■□□□ 1.06
UBE2D3-215ENST00000503418 XPNPEP1Q9NQW7 623 aa21.67■■□□□ 1.06
UBE2D3-215ENST00000503418 RAPGEFL1Q9UHV5 662 aa21.67■■□□□ 1.06
UBE2D3-215ENST00000503418 C5orf42Q9H799 3197 aa21.67■■□□□ 1.06
UBE2D3-215ENST00000503418 MEIS3P2A8K0S8 358 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 NT5C1B-RDH14C9J2C7 533 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 PI4K2BG5E9Z4 385 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 ZC3H11AO75152 810 aaKnown RBP eCLIP21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 LYPLA2O95372 231 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 ALDH7A1P49419 539 aaKnown RBP21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 BCAR1P56945 870 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 HMGN5P82970 282 aaKnown RBP21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 RBM10P98175 930 aaKnown RBP21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 GNL2Q13823 731 aaKnown RBP21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 DUSP6Q16828 381 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 TMC7Q7Z402 723 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 SLC39A11Q8N1S5 342 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 FAM184AQ8NB25 1140 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 CDCA3Q99618 268 aaPredicted RBP21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 KIF2CQ99661 725 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 SH2B1Q9NRF2 756 aaPredicted RBP21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 ANKEF1Q9NU02 776 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 PCDHB2Q9Y5E7 798 aa21.66■■□□□ 1.06
UBE2D3-215ENST00000503418 FSD2A1L4K1 749 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 FAM86C2PA6NEL3 165 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 DGAT1O75907 488 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 ERLIN2O94905 339 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 CA8P35219 290 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 RNASELQ05823 741 aaKnown RBP21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 MXD4Q14582 209 aaPredicted RBP21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 NOMO2Q5JPE7 1267 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 TMEM31Q5JXX7 168 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 SMRP1Q8NCR6 262 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 PIGOQ8TEQ8 1089 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 PGBD4Q96DM1 585 aa21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 NGRNQ9NPE2 291 aaKnown RBP21.65■■□□□ 1.06
UBE2D3-215ENST00000503418 A0A087WWV3 80 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 HIDE1A8MVS5 230 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 ZNF623O75123 536 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 EYA4O95677 639 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 COASYQ13057 564 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 TFDP1Q14186 410 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 ZNF174Q15697 407 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 VN1R2Q8NFZ6 395 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 RSPH1Q8WYR4 309 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 TMEM169Q96HH4 297 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 POP1Q99575 1024 aaKnown RBP21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 LRFN3Q9BTN0 628 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 GBP3Q9H0R5 595 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 FOXP1Q9H334 677 aaPredicted RBP21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 TBC1D13Q9NVG8 400 aa21.64■■□□□ 1.05
UBE2D3-215ENST00000503418 C19orf67A6NJJ6 358 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 USO1O60763 962 aaKnown RBP21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 OFD1O75665 1012 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 TECP42680 631 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 RARRES1P49788 294 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 LLGL2Q6P1M3 1020 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 FBXO18Q8NFZ0 1043 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 URGCPQ8TCY9 931 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 ASAP3Q8TDY4 903 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 NRDE2Q9H7Z3 1164 aa21.63■■□□□ 1.05
UBE2D3-215ENST00000503418 INO80B-WBP1J3KQ70 363 aa21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 OR52Z1P0C646 297 aa21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 SRGAP2BP0DMP2 458 aa21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 ALADP13716 330 aa21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 HOXA11P31270 313 aaPredicted RBP21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 RBM25P49756 843 aaKnown RBP21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 PTENP60484 403 aa21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 SMC1AQ14683 1233 aaKnown RBP21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 TTC38Q5R3I4 469 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms