RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 PCBP1Q15365 356 aaKnown RBP eCLIP8.08□□□□□ -1.12
USP46-203ENST00000502443 TWF2Q6IBS0 349 aaKnown RBP8.08□□□□□ -1.12
USP46-203ENST00000502443 IFNLR1Q8IU57 520 aaPredicted RBP8.08□□□□□ -1.12
USP46-203ENST00000502443 ZBTB8OSQ8IWT0 167 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 RNF169Q8NCN4 708 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 DEPTORQ8TB45 409 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 KCNG4Q8TDN1 519 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 BSNDQ8WZ55 320 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 DRC1Q96MC2 740 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 NFKBIZQ9BYH8 718 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 PANK2Q9BZ23 570 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 AGPAT5Q9NUQ2 364 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 MTUS1Q9ULD2 1270 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 ATP6V1DQ9Y5K8 247 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 MYH11P35749 1972 aa8.08□□□□□ -1.12
USP46-203ENST00000502443 TCHHQ07283 1943 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 MYO9BQ13459 2157 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 NPHP3-ACAD11A0A0J9YXS1 232 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 A0A0U1RQF3 1178 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 LINC01553A4QN01 128 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 CCDC169A6NNP5 214 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 SFI1A8K8P3 1242 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 TSPAN1O60635 241 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 FGFR1P11362 822 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 SKIP12755 728 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 LIG1P18858 919 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 GUCY2CP25092 1073 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 HOXA11P31270 313 aaPredicted RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 DDIT3P35638 169 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 GATMP50440 423 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 PEX3P56589 373 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 KRT85P78386 507 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 FAM189BP81408 668 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 MBTD1Q05BQ5 628 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 DMP1Q13316 513 aaPredicted RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 BTG3Q14201 252 aaPredicted RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 PAN2Q504Q3 1202 aaKnown RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 ARSHQ5FYA8 562 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 RRAGBQ5VZM2 374 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 NOTUMQ6P988 496 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 CCDC73Q6ZRK6 1079 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 GPBP1Q86WP2 473 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 ECHDC2Q86YB7 292 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 FIBCD1Q8N539 461 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 PDILTQ8N807 584 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 SP7Q8TDD2 431 aaPredicted RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 LRRC15Q8TF66 581 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 ARNTL2Q8WYA1 636 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 LARP4BQ92615 738 aaKnown RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 RAD54LQ92698 747 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 ZNF689Q96CS4 500 aaPredicted RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 CPB2Q96IY4 423 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 CHAMP1Q96JM3 812 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 GUCD1Q96NT3 240 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 CDX2Q99626 313 aaPredicted RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 KIFC3Q9BVG8 833 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 TIPINQ9BVW5 301 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 C2orf40Q9H1Z8 148 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 PRDM12Q9H4Q4 367 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 ELAC1Q9H777 363 aaKnown RBP8.07□□□□□ -1.12
USP46-203ENST00000502443 BLOC1S4Q9NUP1 217 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 TMEM161AQ9NX61 479 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 KCND2Q9NZV8 630 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 RCOR1Q9UKL0 485 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 PCDHA7Q9UN72 937 aa8.07□□□□□ -1.12
USP46-203ENST00000502443 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 ADGRA3Q8IWK6 1321 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 TBKBP1A7MCY6 615 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 K7ERI5 159 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 B4GALT5O43286 388 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 EOMESO95936 686 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 KRT18P05783 430 aaKnown RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 ARF4P18085 180 aaPredicted RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 AXLP30530 894 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 ANP32AP39687 249 aaKnown RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 STAT6P42226 847 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 NPTX2P47972 431 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 RAB27AP51159 221 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 EFNA5P52803 228 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 NUCB2P80303 420 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 CACNB1Q02641 598 aaPredicted RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 MAPK7Q13164 816 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 PRPF4BQ13523 1007 aaKnown RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 MAPK6Q16659 721 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 TMEM132AQ24JP5 1023 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 LONRF3Q496Y0 759 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 AXDND1Q5T1B0 1012 aaPredicted RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 CDCA2Q69YH5 1023 aaPredicted RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 SHC4Q6S5L8 630 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 CMTR2Q8IYT2 770 aaKnown RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 ABI1Q8IZP0 508 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 DAW1Q8N136 415 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 MYLIPQ8WY64 445 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 SPATA32Q96LK8 384 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 TGS1Q96RS0 853 aaKnown RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 GAS2L1Q99501 681 aaPredicted RBP8.06□□□□□ -1.12
USP46-203ENST00000502443 REEP2Q9BRK0 252 aa8.06□□□□□ -1.12
USP46-203ENST00000502443 C17orf80Q9BSJ5 609 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms