RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 NFKBIZQ9BYH8 718 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 CHST12Q9NRB3 414 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 AGPAT5Q9NUQ2 364 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 LRFN2Q9ULH4 789 aa18.54■□□□□ 0.56
PRKCB-210ENST00000498739 SFI1A8K8P3 1242 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 C9IYK1 514 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 KRT18P05783 430 aaKnown RBP18.53■□□□□ 0.56
PRKCB-210ENST00000498739 STAG3L1P0CL83 205 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 PEX3P56589 373 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 NAALADL2Q58DX5 795 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 ARSHQ5FYA8 562 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 PPP2R2DQ66LE6 453 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 CDCA2Q69YH5 1023 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-210ENST00000498739 GPR153Q6NV75 609 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 NPAS4Q8IUM7 802 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 KIFC3Q9BVG8 833 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 SCAND2PQ9GZW5 306 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-210ENST00000498739 C2orf40Q9H1Z8 148 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 SLC28A3Q9HAS3 691 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 DACT1Q9NYF0 836 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 FAM13BQ9NYF5 915 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 CIZ1Q9ULV3 898 aaPredicted RBP18.53■□□□□ 0.56
PRKCB-210ENST00000498739 INSL6Q9Y581 213 aa18.53■□□□□ 0.56
PRKCB-210ENST00000498739 GBF1Q92538 1859 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 LCHNA4D1U4 455 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 CCDC169A6NNP5 214 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 TSPAN1O60635 241 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 LIG1P18858 919 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 HTRA4P83105 476 aaPredicted RBP18.52■□□□□ 0.56
PRKCB-210ENST00000498739 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
PRKCB-210ENST00000498739 DMP1Q13316 513 aaPredicted RBP18.52■□□□□ 0.56
PRKCB-210ENST00000498739 PCBP1Q15365 356 aaKnown RBP eCLIP18.52■□□□□ 0.562e-7■■■■■ 34.6
PRKCB-210ENST00000498739 RESP18Q5W5W9 173 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 TWF2Q6IBS0 349 aaKnown RBP18.52■□□□□ 0.56
PRKCB-210ENST00000498739 Q7L0L9 218 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 SV2BQ7L1I2 683 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 REEP2Q9BRK0 252 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 GDPD2Q9HCC8 539 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 ODF2LQ9ULJ1 636 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 PCDHB7Q9Y5E2 793 aa18.52■□□□□ 0.56
PRKCB-210ENST00000498739 ADGRA3Q8IWK6 1321 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 TMEM265A0A087WTH1 108 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 NPTX2P47972 431 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 AMHR2Q16671 573 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 DHX58Q96C10 678 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 CPB2Q96IY4 423 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 FAM161BQ96MY7 647 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 C17orf75Q9HAS0 396 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 KMT5AQ9NQR1 393 aa18.51■□□□□ 0.55
PRKCB-210ENST00000498739 PRMT7Q9NVM4 692 aaPredicted RBP18.51■□□□□ 0.55
PRKCB-210ENST00000498739 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
PRKCB-210ENST00000498739 B4GALT5O43286 388 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 FAM13AO94988 1023 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 PLS3P13797 630 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 AXLP30530 894 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 HOXA11P31270 313 aaPredicted RBP18.5■□□□□ 0.55
PRKCB-210ENST00000498739 GIT2Q14161 759 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 TPRNQ4KMQ1 711 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 ADALQ6DHV7 355 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 DYMQ7RTS9 669 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 ECHDC2Q86YB7 292 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 CRIPAKQ8N1N5 446 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 DEFB123Q8N688 67 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 RNF169Q8NCN4 708 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 TTYH1Q9H313 450 aaPredicted RBP18.5■□□□□ 0.55
PRKCB-210ENST00000498739 ZHX3Q9H4I2 956 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 ZNF576Q9H609 170 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 ELAC1Q9H777 363 aaKnown RBP18.5■□□□□ 0.55
PRKCB-210ENST00000498739 TMEM161AQ9NX61 479 aa18.5■□□□□ 0.55
PRKCB-210ENST00000498739 A0A0U1RQF3 1178 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 TBCAO75347 108 aaKnown RBP18.49■□□□□ 0.55
PRKCB-210ENST00000498739 DGKIO75912 1065 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 ARHGEF15O94989 841 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 PRKCBP05771 671 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 ARF4P18085 180 aaPredicted RBP18.49■□□□□ 0.55
PRKCB-210ENST00000498739 EFNA5P52803 228 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 FAM189BP81408 668 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 E2F4Q16254 413 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 MAPK6Q16659 721 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 TMEM132AQ24JP5 1023 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 NOTUMQ6P988 496 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 IQUBQ8NA54 791 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 CCDC113Q9H0I3 377 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 FZD8Q9H461 694 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 FAM105AQ9NUU6 356 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 CHMP5Q9NZZ3 219 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 LARSQ9P2J5 1176 aaKnown RBP18.49■□□□□ 0.55
PRKCB-210ENST00000498739 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
PRKCB-210ENST00000498739 PHLPP2Q6ZVD8 1323 aa18.49■□□□□ 0.55
PRKCB-210ENST00000498739 LINC01553A4QN01 128 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 MYMKA6NI61 221 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 K7ERI5 159 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 SLC16A4O15374 487 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 POLR2DO15514 142 aaKnown RBP18.48■□□□□ 0.55
PRKCB-210ENST00000498739 FGFR1P11362 822 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 SKIP12755 728 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 GATMP50440 423 aa18.48■□□□□ 0.55
PRKCB-210ENST00000498739 RAB27AP51159 221 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms