RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 RTN1Q16799 776 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 PRR16Q569H4 304 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 LINC01465Q8N7H1 131 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 ZNF713Q8N859 430 aaPredicted RBP13.16□□□□□ -0.3
CDK9-205ENST00000498339 KLHL5Q96PQ7 755 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 FAM193BQ96PV7 902 aaPredicted RBP13.16□□□□□ -0.3
CDK9-205ENST00000498339 BARHL2Q9NY43 387 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
CDK9-205ENST00000498339 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 PATJQ8NI35 1801 aa13.16□□□□□ -0.3
CDK9-205ENST00000498339 CLUHO75153 1309 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 URODP06132 367 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 SRFP11831 508 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 AK2P54819 239 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 DCLK2Q8N568 766 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 GPR152Q8TDT2 470 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 CNTNAP3BQ96NU0 1288 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 VN1R3Q9BXE9 311 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 CNTNAP3Q9BZ76 1288 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 PIDD1Q9HB75 910 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 ARHGEF3Q9NR81 526 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 CHST12Q9NRB3 414 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 FAM105AQ9NUU6 356 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 NAP1L2Q9ULW6 460 aaPredicted RBP13.15□□□□□ -0.3
CDK9-205ENST00000498339 SIT1Q9Y3P8 196 aa13.15□□□□□ -0.3
CDK9-205ENST00000498339 V9GY48 417 aaPredicted RBP13.15□□□□□ -0.3
CDK9-205ENST00000498339 A0A087WZ62 844 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 GOLGA8AA7E2F4 631 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 MEIS3P2A8K0S8 358 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 GOLGA8BA8MQT2 603 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 INPPL1O15357 1258 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 ZBTB43O43298 467 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
CDK9-205ENST00000498339 N4BP1O75113 896 aaKnown RBP13.14□□□□□ -0.31
CDK9-205ENST00000498339 KRT37O76014 449 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 ADH1AP07327 375 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 SP9P0CG40 484 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 DNM2P50570 870 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 RAB27AP51159 221 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
CDK9-205ENST00000498339 RSPO4Q2I0M5 234 aaPredicted RBP13.14□□□□□ -0.31
CDK9-205ENST00000498339 APOA5Q6Q788 366 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 GET4Q7L5D6 327 aaPredicted RBP13.14□□□□□ -0.31
CDK9-205ENST00000498339 CATSPER4Q7RTX7 472 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
CDK9-205ENST00000498339 PGBD4Q96DM1 585 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 FDXACB1Q9BRP7 624 aaPredicted RBP13.14□□□□□ -0.31
CDK9-205ENST00000498339 DISC1Q9NRI5 854 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 NCDNQ9UBB6 729 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 DPP7Q9UHL4 492 aa13.14□□□□□ -0.31
CDK9-205ENST00000498339 SLC27A2O14975 620 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 ZNF862O60290 1169 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 OFD1O75665 1012 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 GLUD1P00367 558 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 CYP3A4P08684 503 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 DRP2Q13474 957 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 UGCGQ16739 394 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 SGMS1Q86VZ5 419 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 ZNF280BQ86YH2 543 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 RHPN2Q8IUC4 686 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 REXO1Q8N1G1 1221 aaKnown RBP13.13□□□□□ -0.31
CDK9-205ENST00000498339 SLC44A3Q8N4M1 653 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 NLRP4Q96MN2 994 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 INO80BQ9C086 356 aaPredicted RBP13.13□□□□□ -0.31
CDK9-205ENST00000498339 WDR6Q9NNW5 1121 aaKnown RBP13.13□□□□□ -0.31
CDK9-205ENST00000498339 EPS15L1Q9UBC2 864 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
CDK9-205ENST00000498339 PRG3Q9Y2Y8 225 aaPredicted RBP13.13□□□□□ -0.31
CDK9-205ENST00000498339 CACNA1IQ9P0X4 2223 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 B4GALT3O60512 393 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 GAS7O60861 476 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 RFPL2O75678 378 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 POMCP01189 267 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 CDC42EP1Q00587 391 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 DCLRE1AQ6PJP8 1040 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 ST13P5Q8NFI4 369 aaPredicted RBP13.12□□□□□ -0.31
CDK9-205ENST00000498339 CMASQ8NFW8 434 aaPredicted RBP13.12□□□□□ -0.31
CDK9-205ENST00000498339 EXOC6Q8TAG9 804 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 PHKBQ93100 1093 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 NXPE3Q969Y0 559 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 MYADMQ96S97 322 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 FOXQ1Q9C009 403 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 RSAD1Q9HA92 442 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 C6orf50Q9HD87 102 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 DLL3Q9NYJ7 618 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 SSX2IPQ9Y2D8 614 aa13.12□□□□□ -0.31
CDK9-205ENST00000498339 NRP1O14786 923 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 TEX28O15482 410 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 DDHD2O94830 711 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 SOD2P04179 222 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 ALDH2P05091 517 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 SPATA31D3P0C874 917 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 OR1G1P47890 313 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 GLUD2P49448 558 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms