RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 ADCY7P51828 1080 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 AP3B2Q13367 1082 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 NOMO2Q5JPE7 1267 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 PPP1R18Q6NYC8 613 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 ZNF280BQ86YH2 543 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 SMAP1Q8IYB5 467 aaPredicted RBP18.63■□□□□ 0.57
VIM-208ENST00000497849 MAP4K1Q92918 833 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 TMEM87BQ96K49 555 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 ZNF577Q9BSK1 485 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 GBP3Q9H0R5 595 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 MAN1C1Q9NR34 630 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 ARHGEF3Q9NR81 526 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 CHST12Q9NRB3 414 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 INPP5FQ9Y2H2 1132 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 GTF3C3Q9Y5Q9 886 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 CNTNAP5Q8WYK1 1306 aa18.63■□□□□ 0.57
VIM-208ENST00000497849 CCDC195A0A1B0GUA6 201 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 SMCO2A6NFE2 343 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 ZNF862O60290 1169 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 LRRN2O75325 713 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 CHMLP26374 656 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 ATXN1P54253 815 aaKnown RBP18.62■□□□□ 0.57
VIM-208ENST00000497849 DRP2Q13474 957 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 GLB1LQ6UWU2 654 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 NLRP7Q8WX94 980 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 STAMQ92783 540 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 NXPE3Q969Y0 559 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 FAM167AQ96KS9 214 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 SCLT1Q96NL6 688 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 RHOBTB2Q9BYZ6 727 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 FOXQ1Q9C009 403 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 TBC1D22BQ9NU19 505 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 SLC12A7Q9Y666 1083 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 CLUHO75153 1309 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 CHD6Q8TD26 2715 aa18.62■□□□□ 0.57
VIM-208ENST00000497849 PATJQ8NI35 1801 aa18.61■□□□□ 0.57
VIM-208ENST00000497849 COL4A3Q01955 1670 aa18.61■□□□□ 0.57
VIM-208ENST00000497849 KINO60870 393 aaKnown RBP18.61■□□□□ 0.57
VIM-208ENST00000497849 DDHD2O94830 711 aa18.61■□□□□ 0.57
VIM-208ENST00000497849 CYP3A4P08684 503 aa18.61■□□□□ 0.57
VIM-208ENST00000497849 MCM5P33992 734 aa18.61■□□□□ 0.57
VIM-208ENST00000497849 RNASELQ05823 741 aaKnown RBP18.61■□□□□ 0.57
VIM-208ENST00000497849 PJA1Q8NG27 643 aa18.61■□□□□ 0.57
VIM-208ENST00000497849 RUFY2Q8WXA3 655 aa18.61■□□□□ 0.57
VIM-208ENST00000497849 MRPL17Q9NRX2 175 aaKnown RBP18.61■□□□□ 0.57
VIM-208ENST00000497849 FAM105AQ9NUU6 356 aa18.61■□□□□ 0.57
VIM-208ENST00000497849 RBM8AQ9Y5S9 174 aaKnown RBP18.61■□□□□ 0.57
VIM-208ENST00000497849 MTCL1Q9Y4B5 1905 aaKnown RBP18.61■□□□□ 0.57
VIM-208ENST00000497849 USP24Q9UPU5 2620 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 INPPL1O15357 1258 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 SGSM2O43147 1006 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 ZNF623O75123 536 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 RFPL2O75678 378 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 OATP04181 439 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 MYBP10242 640 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 FUT2Q10981 343 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 VARS2Q5ST30 1063 aaKnown RBP18.6■□□□□ 0.57
VIM-208ENST00000497849 TTC22Q5TAA0 569 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 TWF2Q6IBS0 349 aaKnown RBP18.6■□□□□ 0.57
VIM-208ENST00000497849 DCLRE1AQ6PJP8 1040 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 CYP26C1Q6V0L0 522 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 MICU3Q86XE3 530 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 ZNF707Q96C28 371 aaPredicted RBP18.6■□□□□ 0.57
VIM-208ENST00000497849 SLC2A4RGQ9NR83 387 aa18.6■□□□□ 0.57
VIM-208ENST00000497849 DOCK6Q96HP0 2047 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 MYH15Q9Y2K3 1946 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 ANHXE9PGG2 379 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 C2CD2LO14523 706 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 ADAMTS3O15072 1205 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 PAPLNO95428 1278 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 LAMP2P13473 410 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 AFF1P51825 1210 aaKnown RBP18.59■□□□□ 0.57
VIM-208ENST00000497849 STARD6P59095 220 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 JAKMIP3Q5VZ66 844 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 ST13P5Q8NFI4 369 aaPredicted RBP18.59■□□□□ 0.57
VIM-208ENST00000497849 LRRC2Q9BYS8 371 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 GCOM2Q9BZD3 368 aaPredicted RBP18.59■□□□□ 0.57
VIM-208ENST00000497849 NRBP2Q9NSY0 501 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 STK39Q9UEW8 545 aa18.59■□□□□ 0.57
VIM-208ENST00000497849 A0A087WZ62 844 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 TEX28O15482 410 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 SKIP12755 728 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 PRKCEQ02156 737 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 HTR4Q13639 388 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 TARBP2Q15633 366 aaKnown RBP18.58■□□□□ 0.56
VIM-208ENST00000497849 UGCGQ16739 394 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 ZNF528Q3MIS6 628 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 AGMOQ6ZNB7 445 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 TAS1R1Q7RTX1 841 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 SGMS1Q86VZ5 419 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 SMG7Q92540 1137 aaKnown RBP18.58■□□□□ 0.56
VIM-208ENST00000497849 RPS6KC1Q96S38 1066 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 FDXACB1Q9BRP7 624 aaPredicted RBP18.58■□□□□ 0.56
VIM-208ENST00000497849 BARHL2Q9NY43 387 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 NCDNQ9UBB6 729 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 PIN4Q9Y237 131 aaKnown RBP18.58■□□□□ 0.56
VIM-208ENST00000497849 SAMM50Q9Y512 469 aa18.58■□□□□ 0.56
VIM-208ENST00000497849 V9GY48 417 aaPredicted RBP18.58■□□□□ 0.56
VIM-208ENST00000497849 NRP1O14786 923 aa18.57■□□□□ 0.56
VIM-208ENST00000497849 SOD2P04179 222 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms