RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 AGO3Q9H9G7 860 aaKnown RBP6.74□□□□□ -1.33
SNX13-211ENST00000496855 VTA1Q9NP79 307 aa6.74□□□□□ -1.33
SNX13-211ENST00000496855 PRSS50Q9UI38 385 aa6.74□□□□□ -1.33
SNX13-211ENST00000496855 NRP2O60462 931 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 TOX4O94842 621 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 SEC24DO94855 1032 aaPredicted RBP6.73□□□□□ -1.33
SNX13-211ENST00000496855 GAAP10253 952 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 ZNF20P17024 532 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 XPAP23025 273 aaPredicted RBP6.73□□□□□ -1.33
SNX13-211ENST00000496855 PPARAQ07869 468 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 FAPQ12884 760 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 FSCN1Q16658 493 aaKnown RBP6.73□□□□□ -1.33
SNX13-211ENST00000496855 GAGE13Q4V321 117 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 CT83Q5H943 113 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
SNX13-211ENST00000496855 SLC41A1Q8IVJ1 513 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 UIMC1Q96RL1 719 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 GPHA2Q96T91 129 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 FDXACB1Q9BRP7 624 aaPredicted RBP6.73□□□□□ -1.33
SNX13-211ENST00000496855 KLC2Q9H0B6 622 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 PRDM12Q9H4Q4 367 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 C14orf93Q9H972 538 aaKnown RBP6.73□□□□□ -1.33
SNX13-211ENST00000496855 PLA2G3Q9NZ20 509 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 JAG2Q9Y219 1238 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 TCAF1Q9Y4C2 921 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 GOLGA8BA8MQT2 603 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 VSIG10L2P0DP72 767 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 COMTP21964 271 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 KIR2DL3P43628 341 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 CD69Q07108 199 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 TRIM25Q14258 630 aaKnown RBP6.73□□□□□ -1.33
SNX13-211ENST00000496855 HS1BP3Q53T59 392 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 RNF219Q5W0B1 726 aaPredicted RBP6.73□□□□□ -1.33
SNX13-211ENST00000496855 ZNF585AQ6P3V2 769 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 GAREM2Q75VX8 874 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 POLNQ7Z5Q5 900 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 UNC5BQ8IZJ1 945 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 OR14C36Q8NHC7 312 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 KCTD10Q9H3F6 313 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 MCM8Q9UJA3 840 aa6.73□□□□□ -1.33
SNX13-211ENST00000496855 A0A1W2PRX2 142 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 LY86O95711 162 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 JUNP05412 331 aaKnown RBP6.72□□□□□ -1.33
SNX13-211ENST00000496855 LPLP06858 475 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 ENPP1P22413 925 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 SELENOPP49908 381 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 FOXL1Q12952 345 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 GRM7Q14831 915 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 UGT8Q16880 541 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 KRT40Q6A162 431 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 ADGRE4PQ86SQ3 457 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 DDX42Q86XP3 938 aaKnown RBP eCLIP6.72□□□□□ -1.33
SNX13-211ENST00000496855 CMIPQ8IY22 773 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 PIK3C3Q8NEB9 887 aa6.72□□□□□ -1.33
SNX13-211ENST00000496855 EAF2Q96CJ1 260 aaPredicted RBP6.72□□□□□ -1.33
SNX13-211ENST00000496855 EVLQ9UI08 416 aaPredicted RBP6.72□□□□□ -1.33
SNX13-211ENST00000496855 PRKD3O94806 890 aa6.71□□□□□ -1.34
SNX13-211ENST00000496855 MSX2P35548 267 aaPredicted RBP6.71□□□□□ -1.34
SNX13-211ENST00000496855 NRG3P56975 720 aa6.71□□□□□ -1.34
SNX13-211ENST00000496855 GLB1L2Q8IW92 636 aa6.71□□□□□ -1.34
SNX13-211ENST00000496855 LMBR1Q8WVP7 490 aa6.71□□□□□ -1.34
SNX13-211ENST00000496855 ATP8A1Q9Y2Q0 1164 aa6.71□□□□□ -1.34
SNX13-211ENST00000496855 CDY2AQ9Y6F7 541 aa6.71□□□□□ -1.34
SNX13-211ENST00000496855 PHLDB1Q86UU1 1377 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 GOLGA8AA7E2F4 631 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 MTSS1O43312 755 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 LGALS4P56470 323 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 MGAT5Q09328 741 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.7□□□□□ -1.34
SNX13-211ENST00000496855 LMBR1LQ6UX01 489 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 Q6ZSN1 163 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 COG1Q8WTW3 980 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 AHCYL2Q96HN2 611 aaKnown RBP6.7□□□□□ -1.34
SNX13-211ENST00000496855 TMEM176AQ96HP8 235 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 CDK5RAP1Q96SZ6 601 aaKnown RBP6.7□□□□□ -1.34
SNX13-211ENST00000496855 GPR20Q99678 358 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 IL23AQ9NPF7 189 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 C14orf119Q9NWQ9 140 aa6.7□□□□□ -1.34
SNX13-211ENST00000496855 A0A1W2PR48 441 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 UBE2QL1A1L167 161 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 ALDH1A2O94788 518 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 ACO1P21399 889 aaKnown RBP6.69□□□□□ -1.34
SNX13-211ENST00000496855 SCAND1P57086 179 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 SPIDRQ14159 915 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 R3HDM1Q15032 1099 aaKnown RBP6.69□□□□□ -1.34
SNX13-211ENST00000496855 CDSNQ15517 529 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 EDAQ92838 391 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 RAX2Q96IS3 184 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 ORAI2Q96SN7 254 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 ADOQ96SZ5 270 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 ING3Q9NXR8 418 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 RCAN3Q9UKA8 241 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 EDARQ9UNE0 448 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 TSC22D4Q9Y3Q8 395 aa6.69□□□□□ -1.34
SNX13-211ENST00000496855 MUSKO15146 869 aa6.68□□□□□ -1.34
SNX13-211ENST00000496855 MAMDC4Q6UXC1 1216 aa6.68□□□□□ -1.34
SNX13-211ENST00000496855 TAS1R1Q7RTX1 841 aa6.68□□□□□ -1.34
SNX13-211ENST00000496855 PALM2Q8IXS6 379 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms