RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 MRPS27Q92552 414 aaKnown RBP16.84■□□□□ 0.29
NEK4-206ENST00000496822 C8orf76Q96K31 380 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 AGPAT5Q9NUQ2 364 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 FAM105AQ9NUU6 356 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 CD207Q9UJ71 328 aa16.84■□□□□ 0.29
NEK4-206ENST00000496822 A0A087WWV3 80 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 LYPLA2O95372 231 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 PLCB3Q01970 1234 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 SMAD4Q13485 552 aaKnown RBP16.83■□□□□ 0.28
NEK4-206ENST00000496822 SMAD2Q15796 467 aaKnown RBP16.83■□□□□ 0.28
NEK4-206ENST00000496822 FERMT3Q86UX7 667 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 SLC39A11Q8N1S5 342 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 RNF149Q8NC42 400 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 MTRQ99707 1265 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 TCF25Q9BQ70 676 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 LLPHQ9BRT6 129 aaKnown RBP16.83■□□□□ 0.28
NEK4-206ENST00000496822 TLE6Q9H808 572 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 C11orf16Q9NQ32 467 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 LZTS1Q9Y250 596 aa16.83■□□□□ 0.28
NEK4-206ENST00000496822 FAM86C2PA6NEL3 165 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 NT5C1B-RDH14C9J2C7 533 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 GAS2O43903 313 aaKnown RBP16.82■□□□□ 0.28
NEK4-206ENST00000496822 HOXA11P31270 313 aaPredicted RBP16.82■□□□□ 0.28
NEK4-206ENST00000496822 PPM1AP35813 382 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 SAFBQ15424 915 aaKnown RBP eCLIP16.82■□□□□ 0.28
NEK4-206ENST00000496822 DUSP6Q16828 381 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 UBXN11Q5T124 520 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 SRGAP1Q7Z6B7 1085 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 TMEM173Q86WV6 379 aaPredicted RBP16.82■□□□□ 0.28
NEK4-206ENST00000496822 ADHFE1Q8IWW8 467 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 EXOC8Q8IYI6 725 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 ASAP3Q8TDY4 903 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 PIGOQ8TEQ8 1089 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 TCP11Q8WWU5 503 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 C1QTNF1Q9BXJ1 281 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 ENTPD7Q9NQZ7 604 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 SPG21Q9NZD8 308 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 FAM50BQ9Y247 325 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 INPP5FQ9Y2H2 1132 aa16.82■□□□□ 0.28
NEK4-206ENST00000496822 C19orf67A6NJJ6 358 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 HIDE1A8MVS5 230 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 PI4K2BG5E9Z4 385 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 B4GALT3O60512 393 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 RARRES1P49788 294 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 BCAR1P56945 870 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 CAPSQ13938 189 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 ZNF174Q15697 407 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 SMRP1Q8NCR6 262 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
NEK4-206ENST00000496822 MRPL9Q9BYD2 267 aaKnown RBP16.81■□□□□ 0.28
NEK4-206ENST00000496822 ANKEF1Q9NU02 776 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 PRKAG3Q9UGI9 489 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 PCDHB2Q9Y5E7 798 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 C5orf42Q9H799 3197 aa16.81■□□□□ 0.28
NEK4-206ENST00000496822 ZNF623O75123 536 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 ZC3H11AO75152 810 aaKnown RBP eCLIP16.8■□□□□ 0.28
NEK4-206ENST00000496822 MED24O75448 989 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 OFD1O75665 1012 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 EYA4O95677 639 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 SKIP12755 728 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
NEK4-206ENST00000496822 RAB27AP51159 221 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
NEK4-206ENST00000496822 HMGN5P82970 282 aaKnown RBP16.8■□□□□ 0.28
NEK4-206ENST00000496822 COASYQ13057 564 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 NBR1Q14596 966 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 NOMO2Q5JPE7 1267 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 PDE12Q6L8Q7 609 aaKnown RBP16.8■□□□□ 0.28
NEK4-206ENST00000496822 GLB1LQ6UWU2 654 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 AGMOQ6ZNB7 445 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 BCL7CQ8WUZ0 217 aaPredicted RBP16.8■□□□□ 0.28
NEK4-206ENST00000496822 FOXP1Q9H334 677 aaPredicted RBP16.8■□□□□ 0.28
NEK4-206ENST00000496822 SH2B1Q9NRF2 756 aaPredicted RBP16.8■□□□□ 0.28
NEK4-206ENST00000496822 TBC1D13Q9NVG8 400 aa16.8■□□□□ 0.28
NEK4-206ENST00000496822 PUF60Q9UHX1 559 aaKnown RBP16.8■□□□□ 0.28
NEK4-206ENST00000496822 ASAP2O43150 1006 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 TSPAN1O60635 241 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
NEK4-206ENST00000496822 DGAT1O75907 488 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 OR52Z1P0C646 297 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 GLRA2P23416 452 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 PTENP60484 403 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 KRT17Q04695 432 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 KCNC3Q14003 757 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 AMHR2Q16671 573 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 CATSPER3Q86XQ3 398 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 CPB2Q96IY4 423 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 CDCA3Q99618 268 aaPredicted RBP16.79■□□□□ 0.28
NEK4-206ENST00000496822 LRFN3Q9BTN0 628 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 EIF2AQ9BY44 585 aaKnown RBP16.79■□□□□ 0.28
NEK4-206ENST00000496822 POLR3FQ9H1D9 316 aaPredicted RBP16.79■□□□□ 0.28
NEK4-206ENST00000496822 NRDE2Q9H7Z3 1164 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 DNAJB4Q9UDY4 337 aa16.79■□□□□ 0.28
NEK4-206ENST00000496822 USP15Q9Y4E8 981 aaPredicted RBP16.79■□□□□ 0.28
NEK4-206ENST00000496822 ERLIN2O94905 339 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 ARL2P36404 184 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 TECP42680 631 aa16.78■□□□□ 0.28
NEK4-206ENST00000496822 ALDH7A1P49419 539 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms