RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 DARSP14868 501 aaKnown RBP23.99■■□□□ 1.43
C9orf3-222ENST00000496567 RAG1P15918 1043 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 TRAF7Q6Q0C0 670 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 TRIM43Q96BQ3 446 aaPredicted RBP23.99■■□□□ 1.43
C9orf3-222ENST00000496567 GTPBP4Q9BZE4 634 aaKnown RBP23.99■■□□□ 1.43
C9orf3-222ENST00000496567 ARHGAP28Q9P2N2 729 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 SQORQ9Y6N5 450 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 MKI67P46013 3256 aaKnown RBP23.98■■□□□ 1.43
C9orf3-222ENST00000496567 K7ENM7 598 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 IQCF3P0C7M6 154 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 CYP2C18P33260 490 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 STXBP4Q6ZWJ1 553 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 ZNF720Q7Z2F6 126 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 HAUS6Q7Z4H7 955 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 USP38Q8NB14 1042 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 TMEM161BQ8NDZ6 487 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 FIZ1Q96SL8 496 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 ST6GALNAC4Q9H4F1 302 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 TBC1D7Q9P0N9 293 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 TMEM63CQ9P1W3 806 aa23.98■■□□□ 1.43
C9orf3-222ENST00000496567 ALCAMQ13740 583 aa23.97■■□□□ 1.43
C9orf3-222ENST00000496567 PCBP1Q15365 356 aaKnown RBP eCLIP23.97■■□□□ 1.43
C9orf3-222ENST00000496567 KCNN1Q92952 543 aa23.97■■□□□ 1.43
C9orf3-222ENST00000496567 KIFC3Q9BVG8 833 aa23.97■■□□□ 1.43
C9orf3-222ENST00000496567 TMEM134Q9H6X4 195 aa23.97■■□□□ 1.43
C9orf3-222ENST00000496567 PCDHB13Q9Y5F0 798 aa23.97■■□□□ 1.43
C9orf3-222ENST00000496567 UMODL1Q5DID0 1318 aa23.97■■□□□ 1.43
C9orf3-222ENST00000496567 ADGRA3Q8IWK6 1321 aa23.97■■□□□ 1.43
C9orf3-222ENST00000496567 INO80B-WBP1J3KQ70 363 aa23.96■■□□□ 1.43
C9orf3-222ENST00000496567 K7ERI5 159 aa23.96■■□□□ 1.43
C9orf3-222ENST00000496567 NMT1P30419 496 aaKnown RBP23.96■■□□□ 1.43
C9orf3-222ENST00000496567 FBXO47Q5MNV8 452 aa23.96■■□□□ 1.43
C9orf3-222ENST00000496567 DENND3A2RUS2 1198 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 GCNT3O95395 438 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 SFPQP23246 707 aaKnown RBP eCLIP23.95■■□□□ 1.43
C9orf3-222ENST00000496567 CCL23P55773 120 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 GTF2BQ00403 316 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 MAPK6Q16659 721 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 RBM43Q6ZSC3 357 aaKnown RBP23.95■■□□□ 1.43
C9orf3-222ENST00000496567 TRIML1Q8N9V2 468 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 TMEM40Q8WWA1 233 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 HPS3Q969F9 1004 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 HVCN1Q96D96 273 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 WNT8AQ9H1J5 351 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 SLC39A2Q9NP94 309 aa23.95■■□□□ 1.43
C9orf3-222ENST00000496567 RPS6KA5O75582 802 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 RFC2P35250 354 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 MBTD1Q05BQ5 628 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 STRN3Q13033 797 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 TSHZ1Q6ZSZ6 1077 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 TMEM199Q8N511 208 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 MINDY3Q9H8M7 445 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 PRMT7Q9NVM4 692 aaPredicted RBP23.95■■□□□ 1.42
C9orf3-222ENST00000496567 MAN1B1Q9UKM7 699 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 NR2E3Q9Y5X4 410 aa23.95■■□□□ 1.42
C9orf3-222ENST00000496567 TANC1Q9C0D5 1861 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 GPR182O15218 404 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 LETM1O95202 739 aaPredicted RBP23.94■■□□□ 1.42
C9orf3-222ENST00000496567 GHRP10912 638 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 STK4Q13043 487 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 LPIN1Q14693 890 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 FAM187BQ17R55 369 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 ZNF658Q5TYW1 1059 aaPredicted RBP23.94■■□□□ 1.42
C9orf3-222ENST00000496567 MFSD5Q6N075 450 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 SCLYQ96I15 445 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 PRIMPOLQ96LW4 560 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 CCDC113Q9H0I3 377 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 FZD8Q9H461 694 aa23.94■■□□□ 1.42
C9orf3-222ENST00000496567 NOC2LQ9Y3T9 749 aaKnown RBP23.94■■□□□ 1.42
C9orf3-222ENST00000496567 SIP14410 1827 aa23.93■■□□□ 1.42
C9orf3-222ENST00000496567 EIF3DO15371 548 aaKnown RBP eCLIP23.93■■□□□ 1.42
C9orf3-222ENST00000496567 CSDE1O75534 798 aaKnown RBP23.93■■□□□ 1.42
C9orf3-222ENST00000496567 ERLIN2O94905 339 aa23.93■■□□□ 1.42
C9orf3-222ENST00000496567 PRKCBP05771 671 aa23.93■■□□□ 1.42
C9orf3-222ENST00000496567 NCBP1Q09161 790 aaKnown RBP23.93■■□□□ 1.42
C9orf3-222ENST00000496567 MBTPS1Q14703 1052 aa23.93■■□□□ 1.42
C9orf3-222ENST00000496567 CATSPER4Q7RTX7 472 aa23.93■■□□□ 1.42
C9orf3-222ENST00000496567 STRA6Q9BX79 667 aa23.93■■□□□ 1.42
C9orf3-222ENST00000496567 TBX20Q9UMR3 447 aa23.93■■□□□ 1.42
C9orf3-222ENST00000496567 PPP1R37O75864 691 aa23.92■■□□□ 1.42
C9orf3-222ENST00000496567 KIF20AO95235 890 aa23.92■■□□□ 1.42
C9orf3-222ENST00000496567 MYBP10242 640 aa23.92■■□□□ 1.42
C9orf3-222ENST00000496567 ITGB8P26012 769 aa23.92■■□□□ 1.42
C9orf3-222ENST00000496567 CASP5P51878 434 aa23.92■■□□□ 1.42
C9orf3-222ENST00000496567 PAK2Q13177 524 aa23.92■■□□□ 1.42
C9orf3-222ENST00000496567 MORC3Q14149 939 aa23.92■■□□□ 1.42
C9orf3-222ENST00000496567 ZC2HC1CQ53FD0 456 aaPredicted RBP23.92■■□□□ 1.42
C9orf3-222ENST00000496567 PPP4R3CPQ6ZMV5 832 aa23.92■■□□□ 1.42
C9orf3-222ENST00000496567 FAM43BQ6ZT52 329 aaPredicted RBP23.92■■□□□ 1.42
C9orf3-222ENST00000496567 UBE4BO95155 1302 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 BIN1O00499 593 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 ACKR2O00590 384 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 NBNO60934 754 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 RGS19P49795 217 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 L1TD1Q5T7N2 865 aaKnown RBP23.91■■□□□ 1.42
C9orf3-222ENST00000496567 EPM2AIP1Q7L775 607 aaPredicted RBP23.91■■□□□ 1.42
C9orf3-222ENST00000496567 FAM228AQ86W67 206 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 KIAA0895Q8NCT3 520 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 ACCSQ96QU6 501 aa23.91■■□□□ 1.42
C9orf3-222ENST00000496567 FGFBP2Q9BYJ0 223 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms