RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 KLRC1P26715 233 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 PSMD7P51665 324 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 YARSP54577 528 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 POU5F1Q01860 360 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 TSHZ1Q6ZSZ6 1077 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 INTS8Q75QN2 995 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 MAEAQ7L5Y9 396 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 TXNRD3Q86VQ6 643 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 RUNDC3BQ96NL0 473 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 DDX23Q9BUQ8 820 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 AZI2Q9H6S1 392 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 METTL14Q9HCE5 456 aaKnown RBP9.76□□□□□ -0.85
HPS4-217ENST00000496385 NLRC4Q9NPP4 1024 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 DISC1Q9NRI5 854 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 RNF181Q9P0P0 153 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 PARP2Q9UGN5 583 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 PNMA3Q9UL41 463 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
HPS4-217ENST00000496385 TCP11X1B4DZS4 312 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 EYA2O00167 538 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 RASA1P20936 1047 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 PHEXP78562 749 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 NELFCDQ8IXH7 590 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 C17orf50Q8WW18 174 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 RSPH1Q8WYR4 309 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 TNFRSF25Q93038 417 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 RMDN2Q96LZ7 410 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 KBTBD4Q9NVX7 518 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 CEP72Q9P209 647 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 TBC1D30Q9Y2I9 924 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 NOC2LQ9Y3T9 749 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 EIF4E1BA6NMX2 242 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 UBE2Q2LH0YL09 131 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 WNT7AO00755 349 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 GRIN3BO60391 1043 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DCTN3O75935 186 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 MYBL1P10243 752 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 MPP3Q13368 585 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 MTFR1Q15390 333 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 CCDC6Q16204 474 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 LIN52Q52LA3 116 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 SFMBT2Q5VUG0 894 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 C9orf131Q5VYM1 1079 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DUPD1Q68J44 220 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 ANKRD40Q6AI12 368 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 KLC3Q6P597 504 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 NME8Q8N427 588 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 PHC3Q8NDX5 983 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 UCMAQ8WVF2 138 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 GFM2Q969S9 779 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 AGAP3Q96P47 875 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 EPB41L1Q9H4G0 881 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 MMRN2Q9H8L6 949 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DBNDD1Q9H9R9 158 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 ZDHHC18Q9NUE0 388 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DDX25Q9UHL0 483 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 ZBTB48P10074 688 aaPredicted RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 ANXA13P27216 316 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 FKBP4Q02790 459 aaKnown RBP eCLIP9.75□□□□□ -0.85
HPS4-217ENST00000496385 DHX34Q14147 1143 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 TDRD12Q587J7 1177 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 SNX30Q5VWJ9 437 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DAB2IPQ5VWQ8 1189 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 RTKN2Q8IZC4 609 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 SYCE1Q8N0S2 351 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 FANCBQ8NB91 859 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 MAGEB18Q96M61 343 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 MYL10Q9BUA6 226 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 TUBB6Q9BUF5 446 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 PPP1R12CQ9BZL4 782 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DDX47Q9H0S4 455 aaKnown RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 SUCLA2Q9P2R7 463 aaPredicted RBP9.75□□□□□ -0.85
HPS4-217ENST00000496385 ZNF212Q9UDV6 495 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 SUN2Q9UH99 717 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 AMACRQ9UHK6 382 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 GGA1Q9UJY5 639 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 JAG2Q9Y219 1238 aa9.75□□□□□ -0.85
HPS4-217ENST00000496385 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 FER1L6Q2WGJ9 1857 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 SMAPO00193 183 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 RASGRF2O14827 1237 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 MAPK13O15264 365 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 ATP9BO43861 1147 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 ASLP04424 464 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 MARK3P27448 753 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 IFNAR2P48551 515 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 POLGP54098 1239 aaPredicted RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 IFI35P80217 286 aaPredicted RBP9.74□□□□□ -0.85
HPS4-217ENST00000496385 AP1B1Q10567 949 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 ITGA9Q13797 1035 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 WTAPQ15007 396 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 UBE3CQ15386 1083 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 ZNF174Q15697 407 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 CCDC80Q76M96 950 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 VSIG1Q86XK7 387 aa9.74□□□□□ -0.85
HPS4-217ENST00000496385 CATSPER2Q96P56 530 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms