RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 RSPH10B2B2RC85 870 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 RGS20O76081 388 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 NR3C1P04150 777 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 CCDC175P0C221 793 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 RSPH10BP0C881 870 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 KRT13P13646 458 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 SMPD1P17405 629 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 NMT1P30419 496 aaKnown RBP11.23□□□□□ -0.61
HDAC3-214ENST00000495485 CYLC1P35663 651 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-214ENST00000495485 SLC26A2P50443 739 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 PRKCEQ02156 737 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 CETN1Q12798 172 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 ARID5BQ14865 1188 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
HDAC3-214ENST00000495485 FAM102BQ5T8I3 360 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 EEPD1Q7L9B9 569 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 UBE2Q1Q7Z7E8 422 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 USP37Q86T82 979 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 SLC9A9Q8IVB4 645 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 DHX37Q8IY37 1157 aaKnown RBP11.23□□□□□ -0.61
HDAC3-214ENST00000495485 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 PPTC7Q8NI37 304 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 TMEM174Q8WUU8 243 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 PRIMPOLQ96LW4 560 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 GLT1D1Q96MS3 346 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 KATNAL1Q9BW62 490 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 ABHD10Q9NUJ1 306 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 WRAP73Q9P2S5 460 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-214ENST00000495485 SEPT9Q9UHD8 586 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-214ENST00000495485 PHF24Q9UPV7 400 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-214ENST00000495485 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 PHLPP2Q6ZVD8 1323 aa11.23□□□□□ -0.61
HDAC3-214ENST00000495485 CCDC169A6NNP5 214 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 ZBTB39O15060 712 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 N4BP1O75113 896 aaKnown RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 AFPP02771 609 aaKnown RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 OATP04181 439 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 GYPCP04921 128 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 COL6A1P12109 1028 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 HOXD8P13378 290 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 STAT5BP51692 787 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 POLGP54098 1239 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 GTF2BQ00403 316 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 SYCP1Q15431 976 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 DGKDQ16760 1214 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 GNASQ5JWF2 1037 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 MIIPQ5JXC2 388 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 CELF3Q5SZQ8 465 aaKnown RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 UTP14CQ5TAP6 766 aaKnown RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 CEP135Q66GS9 1140 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 HAUS6Q7Z4H7 955 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 TRIM59Q8IWR1 403 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 C12orf56Q8IXR9 622 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 AFAP1L1Q8TED9 768 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 SLC7A3Q8WY07 619 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 NTPCRQ9BSD7 190 aaKnown RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
HDAC3-214ENST00000495485 C11orf49Q9H6J7 331 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 MMRN2Q9H8L6 949 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 KMT5AQ9NQR1 393 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 CYP26B1Q9NR63 512 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 IGSF9BQ9UPX0 1349 aa11.22□□□□□ -0.61
HDAC3-214ENST00000495485 IGKV6D-21A0A0A0MT36 114 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 KIAA0391O15091 583 aaKnown RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 MAPK13O15264 365 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 DYNC1LI2O43237 492 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 GGPS1O95749 300 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 TNNT1P13805 278 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 EN2P19622 333 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 UBA1P22314 1058 aaKnown RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 FECHP22830 423 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 CASP5P51878 434 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 NCKAP1LP55160 1127 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 KRT83P78385 493 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 CDK17Q00537 523 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 SP4Q02446 784 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 PTPN11Q06124 597 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 KCNH2Q12809 1159 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 MAPK7Q13164 816 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 UGCGQ16739 394 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 CCSAPQ6IQ19 270 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 ANO5Q75V66 913 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 PLPPR4Q7Z2D5 763 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 FAM186BQ8IYM0 893 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 CCDC170Q8IYT3 715 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 GLIS3Q8NEA6 775 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 KIF18AQ8NI77 898 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 TCP11Q8WWU5 503 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 DNAJC7Q99615 494 aa11.21□□□□□ -0.61
HDAC3-214ENST00000495485 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms