RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 EXOC8Q8IYI6 725 aa16.53■□□□□ 0.24
PTPN18-216ENST00000495400 VPS52Q8N1B4 723 aa16.53■□□□□ 0.24
PTPN18-216ENST00000495400 NLRP4Q96MN2 994 aa16.53■□□□□ 0.24
PTPN18-216ENST00000495400 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
PTPN18-216ENST00000495400 KCNMB3Q9NPA1 279 aa16.53■□□□□ 0.24
PTPN18-216ENST00000495400 FAM105AQ9NUU6 356 aa16.53■□□□□ 0.24
PTPN18-216ENST00000495400 OFD1O75665 1012 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 P4HBP07237 508 aaKnown RBP16.52■□□□□ 0.24
PTPN18-216ENST00000495400 GCFC2P16383 781 aaKnown RBP16.52■□□□□ 0.24
PTPN18-216ENST00000495400 XBP1P17861 261 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 POLGP54098 1239 aaPredicted RBP16.52■□□□□ 0.24
PTPN18-216ENST00000495400 NPEPPSP55786 919 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 DDX53Q86TM3 631 aaKnown RBP16.52■□□□□ 0.24
PTPN18-216ENST00000495400 FBXL6Q8N531 539 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 SLC7A3Q8WY07 619 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 PGBD4Q96DM1 585 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 NECTIN4Q96NY8 510 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 PRRX2Q99811 253 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 ZBP1Q9H171 429 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 ADAM7Q9H2U9 754 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 NRDE2Q9H7Z3 1164 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 IFT122Q9HBG6 1241 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 TBC1D13Q9NVG8 400 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 VAV3Q9UKW4 847 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 INPP5FQ9Y2H2 1132 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 NR2E1Q9Y466 385 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 PPME1Q9Y570 386 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 COL4A3BPQ9Y5P4 624 aa16.52■□□□□ 0.24
PTPN18-216ENST00000495400 KMT2EQ8IZD2 1858 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 MEIS3P2A8K0S8 358 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 TBX3O15119 743 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 GALTP07902 379 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 RNASELQ05823 741 aaKnown RBP16.51■□□□□ 0.23
PTPN18-216ENST00000495400 SCRN1Q12765 414 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 GIT2Q14161 759 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 SRGAP1Q7Z6B7 1085 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 TMEM173Q86WV6 379 aaPredicted RBP16.51■□□□□ 0.23
PTPN18-216ENST00000495400 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
PTPN18-216ENST00000495400 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 PRSS33Q8NF86 280 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 ASIC4Q96FT7 647 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 IGSF21Q96ID5 467 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 CEP170P1Q96L14 293 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 NAP1L4Q99733 375 aaKnown RBP16.51■□□□□ 0.23
PTPN18-216ENST00000495400 DHX33Q9H6R0 707 aaKnown RBP16.51■□□□□ 0.23
PTPN18-216ENST00000495400 IRAK3Q9Y616 596 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 ZDBF2Q9HCK1 2354 aa16.51■□□□□ 0.23
PTPN18-216ENST00000495400 STK36Q9NRP7 1315 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.5■□□□□ 0.23
PTPN18-216ENST00000495400 MARCH6O60337 910 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 CCNT1O60563 726 aaKnown RBP16.5■□□□□ 0.23
PTPN18-216ENST00000495400 CTSAP10619 480 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 SP100P23497 879 aaPredicted RBP16.5■□□□□ 0.23
PTPN18-216ENST00000495400 RFC5P40937 340 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 MTHFRP42898 656 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 EPHA7Q15375 998 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 IER5LQ5T953 404 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 PIK3AP1Q6ZUJ8 805 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 C4orf19Q8IY42 314 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 PRPF31Q8WWY3 499 aaKnown RBP16.5■□□□□ 0.23
PTPN18-216ENST00000495400 AUTS2Q8WXX7 1259 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 HAS1Q92839 578 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 TMEM143Q96AN5 459 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 GBP3Q9H0R5 595 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 POMKQ9H5K3 350 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 DZANK1Q9NVP4 752 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 WRAP73Q9P2S5 460 aaPredicted RBP16.5■□□□□ 0.23
PTPN18-216ENST00000495400 CDH22Q9UJ99 828 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 PCDHB2Q9Y5E7 798 aa16.5■□□□□ 0.23
PTPN18-216ENST00000495400 ARID2Q68CP9 1835 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 ASAP2O43150 1006 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 PFKFB2O60825 505 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 SRGAP2CP0DJJ0 459 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 SLC11A1P49279 550 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 PTPN5P54829 565 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 OTUD6AQ7L8S5 288 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 MRPL10Q7Z7H8 261 aaKnown RBP16.49■□□□□ 0.23
PTPN18-216ENST00000495400 URGCPQ8TCY9 931 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 OXER1Q8TDS5 423 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 BCL7CQ8WUZ0 217 aaPredicted RBP16.49■□□□□ 0.23
PTPN18-216ENST00000495400 PSPC1Q8WXF1 523 aaKnown RBP16.49■□□□□ 0.23
PTPN18-216ENST00000495400 RIPOR3Q96MK2 946 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 LXNQ9BS40 222 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 DNAJB4Q9UDY4 337 aa16.49■□□□□ 0.23
PTPN18-216ENST00000495400 C2CD4DB7Z1M9 353 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 GAS2O43903 313 aaKnown RBP16.48■□□□□ 0.23
PTPN18-216ENST00000495400 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
PTPN18-216ENST00000495400 YWHABP31946 246 aaKnown RBP16.48■□□□□ 0.23
PTPN18-216ENST00000495400 LAMTOR4Q0VGL1 99 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 RARS2Q5T160 578 aaKnown RBP16.48■□□□□ 0.23
PTPN18-216ENST00000495400 NCAPH2Q6IBW4 605 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 AGMOQ6ZNB7 445 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 ZNF280BQ86YH2 543 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 C12orf76Q8N812 135 aaPredicted RBP16.48■□□□□ 0.23
PTPN18-216ENST00000495400 SLC22A17Q8WUG5 538 aa16.48■□□□□ 0.23
PTPN18-216ENST00000495400 TCP11Q8WWU5 503 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms