RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 MACROD2A1Z1Q3 448 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 DENND3A2RUS2 1198 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 CCDC169A6NNP5 214 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 ANKRD63C9JTQ0 380 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 F8VZ95 297 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 N4BP1O75113 896 aaKnown RBP11.61□□□□□ -0.55
CLCN6-208ENST00000494028 GGPS1O95749 300 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 PNMA6AP0CW24 399 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-208ENST00000494028 KRT13P13646 458 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 H2AFXP16104 143 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-208ENST00000494028 ANXA13P27216 316 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 VAMP7P51809 220 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 MCCD1P59942 119 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-208ENST00000494028 ERVK-9P63128 1117 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 DLG4P78352 724 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 PPP3CAQ08209 521 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 TUBB2AQ13885 445 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 SLC18A3Q16572 532 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 WHAMMP3Q1A5X7 153 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 EPC2Q52LR7 807 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 TEX35Q5T0J7 233 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 METTL7BQ6UX53 244 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 SRGAP1Q7Z6B7 1085 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 ASAP3Q8TDY4 903 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 MORC4Q8TE76 937 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 AFAP1L1Q8TED9 768 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 GTF3C2Q8WUA4 911 aaPredicted RBP11.61□□□□□ -0.55
CLCN6-208ENST00000494028 GOLGA1Q92805 767 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 TUBB2BQ9BVA1 445 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 GPR88Q9GZN0 384 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 DHX33Q9H6R0 707 aaKnown RBP11.61□□□□□ -0.55
CLCN6-208ENST00000494028 NMRK2Q9NPI5 230 aa11.61□□□□□ -0.55
CLCN6-208ENST00000494028 A0A087X0T9 212 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 P4HA2O15460 535 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 PGK2P07205 417 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 FAM228BP0C875 321 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 RFX1P22670 979 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 ADSSP30520 456 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 MAGEA1P43355 309 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-208ENST00000494028 NEDD9Q14511 834 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 TARBP2Q15633 366 aaKnown RBP11.6□□□□□ -0.55
CLCN6-208ENST00000494028 Q3C1V9 767 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 PAPD7Q5XG87 772 aaKnown RBP11.6□□□□□ -0.55
CLCN6-208ENST00000494028 ZNF571Q7Z3V5 609 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-208ENST00000494028 IRF2BP2Q7Z5L9 587 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 CBWD2Q8IUF1 395 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 FBXO16Q8IX29 292 aaPredicted RBP11.6□□□□□ -0.55
CLCN6-208ENST00000494028 TXLNBQ8N3L3 684 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 CEP112Q8N8E3 955 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 LMO3Q8TAP4 145 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 SAAL1Q96ER3 474 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 NTPCRQ9BSD7 190 aaKnown RBP11.6□□□□□ -0.55
CLCN6-208ENST00000494028 MROH8Q9H579 483 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 PNMA3Q9UL41 463 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 DUSP10Q9Y6W6 482 aa11.6□□□□□ -0.55
CLCN6-208ENST00000494028 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 GOLGA8IPA6NC78 632 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 UNCXA6NJT0 531 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 GOLGA8JA6NMD2 632 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 H0YCG3 227 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 RRP9O43818 475 aaKnown RBP11.59□□□□□ -0.55
CLCN6-208ENST00000494028 LGR5O75473 907 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 MOCS3O95396 460 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 PIGRP01833 764 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 FERP16591 822 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 GLRA2P23416 452 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 SOX5P35711 763 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 RFC5P40937 340 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 NAMPTP43490 491 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 MXI1P50539 228 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 SMTNP53814 917 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 CHMP4BP1P59074 171 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 ARID5AQ03989 594 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 PTK2Q05397 1052 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 KCTD2Q14681 263 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
CLCN6-208ENST00000494028 FAM160B1Q5W0V3 765 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 MAP1SQ66K74 1059 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-208ENST00000494028 EEPD1Q7L9B9 569 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 PNMA8AQ86V59 439 aaPredicted RBP11.59□□□□□ -0.55
CLCN6-208ENST00000494028 ARHGEF19Q8IW93 802 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 TRIM58Q8NG06 486 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 UBXN4Q92575 508 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 IFT74Q96LB3 600 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 FBXL18Q96ME1 805 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 MPHOSPH6Q99547 160 aaKnown RBP11.59□□□□□ -0.55
CLCN6-208ENST00000494028 SYT11Q9BT88 431 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 PACSIN1Q9BY11 444 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 NIFKQ9BYG3 293 aaKnown RBP11.59□□□□□ -0.55
CLCN6-208ENST00000494028 PORCNQ9H237 461 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 ZNF408Q9H9D4 720 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 HDAC6Q9UBN7 1215 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 APEX2Q9UBZ4 518 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 SALL4Q9UJQ4 1053 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 DNAJC12Q9UKB3 198 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 MGAMO43451 1857 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 RALGAPA2Q2PPJ7 1873 aa11.59□□□□□ -0.55
CLCN6-208ENST00000494028 LRRIQ3A6PVS8 624 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms