RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 GINS2Q9Y248 185 aa12.74□□□□□ -0.37
LSM2-214ENST00000493387 K7ERI5 159 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 SLC16A4O15374 487 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 TIMP1P01033 207 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 CHRNA1P02708 482 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 CTSHP09668 335 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 SFPQP23246 707 aaKnown RBP eCLIP12.73□□□□□ -0.37
LSM2-214ENST00000493387 RFC2P35250 354 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 PPP1R2P41236 205 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 NCKAP1LP55160 1127 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 NCBP1Q09161 790 aaKnown RBP12.73□□□□□ -0.37
LSM2-214ENST00000493387 TMEM62Q0P6H9 643 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 MAPK6Q16659 721 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
LSM2-214ENST00000493387 RBM43Q6ZSC3 357 aaKnown RBP12.73□□□□□ -0.37
LSM2-214ENST00000493387 ZNF720Q7Z2F6 126 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 HAUS6Q7Z4H7 955 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 DPF3Q92784 378 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 IFT122Q9HBG6 1241 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 PRDM5Q9NQX1 630 aaPredicted RBP12.73□□□□□ -0.37
LSM2-214ENST00000493387 ARHGAP28Q9P2N2 729 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 EXOC7Q9UPT5 735 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 NR2E3Q9Y5X4 410 aa12.73□□□□□ -0.37
LSM2-214ENST00000493387 UBE4BO95155 1302 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 INO80B-WBP1J3KQ70 363 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 K7ENM7 598 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 GPR182O15218 404 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 EIF3DO15371 548 aaKnown RBP eCLIP12.72□□□□□ -0.37
LSM2-214ENST00000493387 CAPN15O75808 1086 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 GCNT3O95395 438 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 RAG1P15918 1043 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 GTF2BQ00403 316 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 STRN3Q13033 797 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 FAM187BQ17R55 369 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 ZNF658Q5TYW1 1059 aaPredicted RBP12.72□□□□□ -0.37
LSM2-214ENST00000493387 TMEM161BQ8NDZ6 487 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 FIZ1Q96SL8 496 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 OSMRQ99650 979 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 PRMT7Q9NVM4 692 aaPredicted RBP12.72□□□□□ -0.37
LSM2-214ENST00000493387 TMEM63CQ9P1W3 806 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 MAN1B1Q9UKM7 699 aa12.72□□□□□ -0.37
LSM2-214ENST00000493387 MYH11P35749 1972 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 DENND3A2RUS2 1198 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 ACKR2O00590 384 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 RPS6KA5O75582 802 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 ERLIN2O94905 339 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 NMT1P30419 496 aaKnown RBP12.71□□□□□ -0.37
LSM2-214ENST00000493387 AXLP30530 894 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 CYP2C18P33260 490 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 MBTD1Q05BQ5 628 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 STIM1Q13586 685 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 COBLL1Q53SF7 1204 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 FBXO47Q5MNV8 452 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 TSHZ1Q6ZSZ6 1077 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 C7orf61Q8IZ16 206 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 RPUSD2Q8IZ73 545 aaKnown RBP12.71□□□□□ -0.37
LSM2-214ENST00000493387 TMEM199Q8N511 208 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 ACCSQ96QU6 501 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 STRA6Q9BX79 667 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 PPP1R12CQ9BZL4 782 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 FZD8Q9H461 694 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 TMEM206Q9H813 350 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 CDHR5Q9HBB8 845 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 TBX20Q9UMR3 447 aa12.71□□□□□ -0.37
LSM2-214ENST00000493387 ADGRA3Q8IWK6 1321 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 TRIM43BA6NCK2 446 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 PPP1R37O75864 691 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 PRKCBP05771 671 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 PFKMP08237 780 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 SNRPFP62306 86 aaKnown RBP12.7□□□□□ -0.38
LSM2-214ENST00000493387 STK4Q13043 487 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 PAK2Q13177 524 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 MORC3Q14149 939 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 LPIN1Q14693 890 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 BMT2Q1RMZ1 405 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 L1TD1Q5T7N2 865 aaKnown RBP12.7□□□□□ -0.38
LSM2-214ENST00000493387 MFSD5Q6N075 450 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 CATSPER4Q7RTX7 472 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 APBB1IPQ7Z5R6 666 aaPredicted RBP12.7□□□□□ -0.38
LSM2-214ENST00000493387 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 SEPT8Q92599 483 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 APBB2Q92870 758 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
LSM2-214ENST00000493387 TRIM43Q96BQ3 446 aaPredicted RBP12.7□□□□□ -0.38
LSM2-214ENST00000493387 ZNF668Q96K58 619 aaPredicted RBP12.7□□□□□ -0.38
LSM2-214ENST00000493387 KIFC3Q9BVG8 833 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 MRPL4Q9BYD3 311 aaKnown RBP12.7□□□□□ -0.38
LSM2-214ENST00000493387 CCDC113Q9H0I3 377 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 SLC39A2Q9NP94 309 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 CHST12Q9NRB3 414 aa12.7□□□□□ -0.38
LSM2-214ENST00000493387 NOC2LQ9Y3T9 749 aaKnown RBP12.7□□□□□ -0.38
LSM2-214ENST00000493387 BIN1O00499 593 aa12.69□□□□□ -0.38
LSM2-214ENST00000493387 CXCL10P02778 98 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms