RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 C17orf53Q8N3J3 647 aaPredicted RBP15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 METTL13Q8N6R0 699 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 PRPF31Q8WWY3 499 aaKnown RBP15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 CEP63Q96MT8 703 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 PDCL3Q9H2J4 239 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 XPNPEP3Q9NQH7 507 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 ADGRA3Q8IWK6 1321 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 RRN3P2A6NIE6 340 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 LRRIQ4A6NIV6 560 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 HAS3O00219 553 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 TGFB1I1O43294 461 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 PGK1P00558 417 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 NR2F2P24468 414 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 RPL13P26373 211 aaKnown RBP15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 PSEN2P49810 448 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 CHMP4BP1P59074 171 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 PURAQ00577 322 aaKnown RBP15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 ZC3H3Q8IXZ2 948 aaKnown RBP15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 DEPTORQ8TB45 409 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 GOLGA5Q8TBA6 731 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 ARMC5Q96C12 935 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 ABHD8Q96I13 439 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 ZNF333Q96JL9 665 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 CNOT6LQ96LI5 555 aaKnown RBP15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 UNC93B1Q9H1C4 597 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 ARHGAP28Q9P2N2 729 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 LIMA1Q9UHB6 759 aaKnown RBP15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 TBX20Q9UMR3 447 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 EXOC7Q9UPT5 735 aa15.46■□□□□ 0.07
PDZRN3-210ENST00000492909 SIP14410 1827 aa15.46■□□□□ 0.06
PDZRN3-210ENST00000492909 NRCAMQ92823 1304 aa15.46■□□□□ 0.06
PDZRN3-210ENST00000492909 MYADML2A6NDP7 307 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 LRRC10BA6NIK2 292 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 CETN3O15182 167 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 ZEB2O60315 1214 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 SMIM10L2AP0DMW4 78 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 SMIM10L2BP0DMW5 78 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 TMOD1P28289 359 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 ADAM9Q13443 819 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 CAPSQ13938 189 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 KRT31Q15323 416 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 MTHFD1LQ6UB35 978 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 APTXQ7Z2E3 356 aaKnown RBP15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 MAP4K3Q8IVH8 894 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 CGNQ9P2M7 1197 aaKnown RBP15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 SUCLA2Q9P2R7 463 aaPredicted RBP15.45■□□□□ 0.06
PDZRN3-210ENST00000492909 ADAMTS4O75173 837 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 GNA14O95837 355 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 NR3C1P04150 777 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 CLCN3P51790 818 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 LAMTOR4Q0VGL1 99 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 NFIL3Q16649 462 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 FILIP1Q7Z7B0 1213 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 KCNN1Q92952 543 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 ZBTB10Q96DT7 871 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 MTG1Q9BT17 334 aaPredicted RBP15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 AGPAT3Q9NRZ7 376 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 DDX20Q9UHI6 824 aaKnown RBP15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 SCN10AQ9Y5Y9 1956 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 A0A1B0GTH6 734 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 CLIC2O15247 247 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 ASAP2O43150 1006 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 MSCO60682 206 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 CCL5P13501 91 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 MTIF2P46199 727 aaKnown RBP15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 SNRPFP62306 86 aaKnown RBP15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 TFDP1Q14186 410 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 FILIP1LQ4L180 1135 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 MARCH8Q5T0T0 291 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 CCDC186Q7Z3E2 898 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 RHPN2Q8IUC4 686 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 DRC7Q8IY82 874 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 LINC01465Q8N7H1 131 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 LMBR1Q8WVP7 490 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 TUBGCP2Q9BSJ2 902 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 IKZF4Q9H2S9 585 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 HMX1Q9NP08 348 aaPredicted RBP15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 TAB2Q9NYJ8 693 aa15.44■□□□□ 0.06
PDZRN3-210ENST00000492909 TRIP12Q14669 1992 aaPredicted RBP15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 K7ERI5 159 aa15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 EFNA5P52803 228 aa15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 COPB1P53618 953 aaKnown RBP15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 RBM10P98175 930 aaKnown RBP15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 STRN3Q13033 797 aa15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 CCDC40Q4G0X9 1142 aa15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 RNF149Q8NC42 400 aa15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 RNF208Q9H0X6 261 aa15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 FRMPD3Q5JV73 1810 aa15.43■□□□□ 0.06
PDZRN3-210ENST00000492909 N4BP3O15049 544 aa15.42■□□□□ 0.06
PDZRN3-210ENST00000492909 SRGAP2CP0DJJ0 459 aa15.42■□□□□ 0.06
PDZRN3-210ENST00000492909 CST5P28325 142 aaPredicted RBP15.42■□□□□ 0.06
PDZRN3-210ENST00000492909 GTF2F1P35269 517 aaKnown RBP eCLIP15.42■□□□□ 0.06
PDZRN3-210ENST00000492909 MYBPC2Q14324 1141 aa15.42■□□□□ 0.06
PDZRN3-210ENST00000492909 NR1I3Q14994 352 aa15.42■□□□□ 0.06
PDZRN3-210ENST00000492909 CDCA2Q69YH5 1023 aaPredicted RBP15.42■□□□□ 0.06
PDZRN3-210ENST00000492909 NFRKBQ6P4R8 1299 aa15.42■□□□□ 0.06
PDZRN3-210ENST00000492909 CXCL17Q6UXB2 119 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms