RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 SFR1Q86XK3 245 aa17.54■□□□□ 0.4
COPS3-210ENST00000492672 IFNLR1Q8IU57 520 aaPredicted RBP17.54■□□□□ 0.4
COPS3-210ENST00000492672 CEP57L1Q8IYX8 460 aa17.54■□□□□ 0.4
COPS3-210ENST00000492672 RPUSD2Q8IZ73 545 aaKnown RBP17.54■□□□□ 0.4
COPS3-210ENST00000492672 CNNM3Q8NE01 707 aa17.54■□□□□ 0.4
COPS3-210ENST00000492672 GLIS3Q8NEA6 775 aa17.54■□□□□ 0.4
COPS3-210ENST00000492672 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
COPS3-210ENST00000492672 ODF2LQ9ULJ1 636 aa17.54■□□□□ 0.4
COPS3-210ENST00000492672 TTC3P53804 2025 aa17.54■□□□□ 0.4
COPS3-210ENST00000492672 INO80B-WBP1J3KQ70 363 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 KLRC4O43908 158 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 NAMPTP43490 491 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 PHKA2P46019 1235 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 UBE2HP62256 183 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 ASIC1P78348 528 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 CDC42EP1Q00587 391 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 POU5F1BQ06416 359 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 TFDP1Q14186 410 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 DSC3Q14574 896 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 ZC2HC1CQ53FD0 456 aaPredicted RBP17.53■□□□□ 0.4
COPS3-210ENST00000492672 ODR4Q5SWX8 454 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 CDCA2Q69YH5 1023 aaPredicted RBP17.53■□□□□ 0.4
COPS3-210ENST00000492672 CNKSR3Q6P9H4 555 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 SRGAP1Q7Z6B7 1085 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 SEPT8Q92599 483 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 CPB2Q96IY4 423 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 IFT74Q96LB3 600 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 GBP4Q96PP9 640 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 TIPINQ9BVW5 301 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 INO80BQ9C086 356 aaPredicted RBP17.53■□□□□ 0.4
COPS3-210ENST00000492672 CCDC113Q9H0I3 377 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 IKZF4Q9H2S9 585 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 KMT5AQ9NQR1 393 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 PANK4Q9NVE7 773 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 COLQQ9Y215 455 aaPredicted RBP17.53■□□□□ 0.4
COPS3-210ENST00000492672 SQORQ9Y6N5 450 aa17.53■□□□□ 0.4
COPS3-210ENST00000492672 TRIP11Q15643 1979 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 FRMD3A2A2Y4 597 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 ENPP3O14638 875 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 TBCAO75347 108 aaKnown RBP17.52■□□□□ 0.4
COPS3-210ENST00000492672 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.4
COPS3-210ENST00000492672 IBSPP21815 317 aaPredicted RBP17.52■□□□□ 0.4
COPS3-210ENST00000492672 HOXA11P31270 313 aaPredicted RBP17.52■□□□□ 0.4
COPS3-210ENST00000492672 DEFB103AP81534 67 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 PNOCQ13519 176 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 FAM109BQ6ICB4 259 aaPredicted RBP17.52■□□□□ 0.4
COPS3-210ENST00000492672 CATSPER4Q7RTX7 472 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 TMEM161BQ8NDZ6 487 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 DEPTORQ8TB45 409 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 NTPCRQ9BSD7 190 aaKnown RBP17.52■□□□□ 0.4
COPS3-210ENST00000492672 PARVGQ9HBI0 331 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 DACT1Q9NYF0 836 aa17.52■□□□□ 0.4
COPS3-210ENST00000492672 GRXCR1A8MXD5 290 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 GTPBP6O43824 516 aaPredicted RBP17.51■□□□□ 0.39
COPS3-210ENST00000492672 TRAK2O60296 914 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 TSPAN1O60635 241 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 CASP5P51878 434 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 NCKAP1LP55160 1127 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 COASYQ13057 564 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 DMP1Q13316 513 aaPredicted RBP17.51■□□□□ 0.39
COPS3-210ENST00000492672 PPP2R5AQ15172 486 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 HERC4Q5GLZ8 1057 aaPredicted RBP17.51■□□□□ 0.39
COPS3-210ENST00000492672 NT5DC1Q5TFE4 455 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 HAUS6Q7Z4H7 955 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 GPT2Q8TD30 523 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 SPIRE2Q8WWL2 714 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 HERVK_113Q902F9 699 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 ADAM2Q99965 735 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 PYM1Q9BRP8 204 aaKnown RBP17.51■□□□□ 0.39
COPS3-210ENST00000492672 FZD8Q9H461 694 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 MAGEF1Q9HAY2 307 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 ARHGAP28Q9P2N2 729 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 USP25Q9UHP3 1055 aa17.51■□□□□ 0.39
COPS3-210ENST00000492672 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 GPR182O15218 404 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 MAPTP10636 758 aaKnown RBP17.5■□□□□ 0.39
COPS3-210ENST00000492672 ARF4P18085 180 aaPredicted RBP17.5■□□□□ 0.39
COPS3-210ENST00000492672 BMP8BP34820 402 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
COPS3-210ENST00000492672 AMPD3Q01432 767 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 KCNA1Q09470 495 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 DPYDQ12882 1025 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 IKBKEQ14164 716 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 RASIP1Q5U651 963 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 CNNM4Q6P4Q7 775 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
COPS3-210ENST00000492672 ZNF710Q8N1W2 664 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 NFKBIZQ9BYH8 718 aa17.5■□□□□ 0.39
COPS3-210ENST00000492672 LARSQ9P2J5 1176 aaKnown RBP17.5■□□□□ 0.39
COPS3-210ENST00000492672 DENND3A2RUS2 1198 aa17.49■□□□□ 0.39
COPS3-210ENST00000492672 K7ENM7 598 aa17.49■□□□□ 0.39
COPS3-210ENST00000492672 K7ERI5 159 aa17.49■□□□□ 0.39
COPS3-210ENST00000492672 PRKCBP05771 671 aa17.49■□□□□ 0.39
COPS3-210ENST00000492672 PFKMP08237 780 aa17.49■□□□□ 0.39
COPS3-210ENST00000492672 MYBP10242 640 aa17.49■□□□□ 0.39
COPS3-210ENST00000492672 SFPQP23246 707 aaKnown RBP eCLIP17.49■□□□□ 0.39
COPS3-210ENST00000492672 EHHADHQ08426 723 aa17.49■□□□□ 0.39
COPS3-210ENST00000492672 KMT5BQ4FZB7 885 aa17.49■□□□□ 0.39
COPS3-210ENST00000492672 UBXN11Q5T124 520 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms