RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 KRT27Q7Z3Y8 459 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 SLC20A1Q8WUM9 679 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 ALG3Q92685 438 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 KAT2BQ92831 832 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 EHMT1Q9H9B1 1298 aa17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 SEPT11Q9NVA2 429 aaKnown RBP17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 MRPL11Q9Y3B7 192 aaKnown RBP17.46■□□□□ 0.39
SEMA4D-220ENST00000492386 FAM107AO95990 144 aa17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 HADHBP55084 474 aaKnown RBP17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 MEFVO15553 781 aaPredicted RBP17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 PPFIA2O75334 1257 aa17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 COPB2P35606 906 aa17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 ZNF211Q13398 564 aaPredicted RBP17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 PRPF4BQ13523 1007 aaKnown RBP17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 PADI6Q6TGC4 694 aa17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 CHURC1Q8WUH1 139 aa17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 ZBTB21Q9ULJ3 1066 aa17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 EMSYQ7Z589 1322 aa17.45■□□□□ 0.38
SEMA4D-220ENST00000492386 TISP43B9A030 160 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 TCP10L2B9ZVM9 353 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 K7ENM7 598 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 VCAM1P19320 739 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 DR1Q01658 176 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 MSL1Q68DK7 614 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 DUPD1Q68J44 220 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 ADAT2Q7Z6V5 191 aaKnown RBP17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 ARHGEF19Q8IW93 802 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 NAP1L3Q99457 506 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 RIT2Q99578 217 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 TRIM31Q9BZY9 425 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 RAB17Q9H0T7 212 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 LRRC4CQ9HCJ2 640 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 UBE2TQ9NPD8 197 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 ZDHHC18Q9NUE0 388 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 BCS1LQ9Y276 419 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 E7EVH7 732 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 KRT13P13646 458 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 PPP3CAQ08209 521 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 PPP2R5EQ16537 467 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 FMO2Q99518 471 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 MXRA8Q9BRK3 442 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 ERP44Q9BS26 406 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 ALG6Q9Y672 507 aa17.44■□□□□ 0.38
SEMA4D-220ENST00000492386 YDJCA8MPS7 323 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 DDX39AO00148 427 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 BCRP11274 1271 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 ITGB5P18084 799 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 TCEAL1Q15170 157 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 EPC2Q52LR7 807 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 C1orf220Q5T0J3 134 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 INTS8Q75QN2 995 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 RHOT2Q8IXI1 618 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 TMEM174Q8WUU8 243 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 GLG1Q92896 1179 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 PCIF1Q9H4Z3 704 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 PPANQ9NQ55 473 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 TMOD4Q9NZQ9 345 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 BCCIPQ9P287 314 aaKnown RBP eCLIP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 CNOT8Q9UFF9 292 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 GOLGA6L10A0A0M3HER8 536 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 DCDC2CA8MYV0 355 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 H0YIN7 160 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 PLA2G6O60733 806 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 VAMP7P51809 220 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 PPP2R2AP63151 447 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 SPDYCQ5MJ68 293 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 C11orf63Q6NUN7 778 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 MAEAQ7L5Y9 396 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 YTHDF3Q7Z739 585 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 NEK9Q8TD19 979 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 VCPKMTQ9H867 229 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 GGA2Q9UJY4 613 aa17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 NOVA2Q9UNW9 492 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-220ENST00000492386 PSME4Q14997 1843 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 FTLP02792 175 aaPredicted RBP17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 TMOD1P28289 359 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 AADACL2Q6P093 401 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 MICALCLQ6ZW33 695 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 CBWD1Q9BRT8 395 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 DEFB129Q9H1M3 183 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 EPB41L4BQ9H329 900 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 ATP8A1Q9Y2Q0 1164 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 FAM187AA6NFU0 413 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 TRAPPC3O43617 180 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 KIAA0754O94854 1291 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 PPARDQ03181 441 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 DHX34Q14147 1143 aaKnown RBP17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 CLUL1Q15846 466 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 ZYXQ15942 572 aaKnown RBP17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 KRT71Q3SY84 523 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 JAMLQ86YT9 394 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 C12orf56Q8IXR9 622 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 OTUD6BQ8N6M0 293 aa17.42■□□□□ 0.38
SEMA4D-220ENST00000492386 C7orf43Q8WVR3 580 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms