RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 EOMESO95936 686 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 DNAJB1P25685 340 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 CAMK1Q14012 370 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 TFDP1Q14186 410 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 TIGD5Q53EQ6 642 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 TJAP1Q5JTD0 557 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 PADI6Q6TGC4 694 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 DTHD1Q6ZMT9 781 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 ASB2Q96Q27 587 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 RAB34Q9BZG1 259 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 FOXD4L1Q9NU39 408 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 FAM105AQ9NUU6 356 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 DDX19AQ9NUU7 478 aaKnown RBP27.41■■□□□ 1.98
UPF3A-209ENST00000492270 MYH15Q9Y2K3 1946 aa27.41■■□□□ 1.98
UPF3A-209ENST00000492270 ARHGEF35A5YM69 484 aa27.4■■□□□ 1.98
UPF3A-209ENST00000492270 MUTP22033 750 aa27.4■■□□□ 1.98
UPF3A-209ENST00000492270 HOXA11P31270 313 aaPredicted RBP27.4■■□□□ 1.98
UPF3A-209ENST00000492270 MRPS5P82675 430 aaKnown RBP27.4■■□□□ 1.98
UPF3A-209ENST00000492270 TCEAL5Q5H9L2 206 aa27.4■■□□□ 1.98
UPF3A-209ENST00000492270 ABI1Q8IZP0 508 aa27.4■■□□□ 1.98
UPF3A-209ENST00000492270 COLGALT1Q8NBJ5 622 aa27.4■■□□□ 1.98
UPF3A-209ENST00000492270 SPPL3Q8TCT6 385 aa27.4■■□□□ 1.98
UPF3A-209ENST00000492270 MMTAG2Q9BU76 263 aaKnown RBP27.4■■□□□ 1.98
UPF3A-209ENST00000492270 LMAN2LQ9H0V9 348 aa27.4■■□□□ 1.98
UPF3A-209ENST00000492270 MYH11P35749 1972 aa27.4■■□□□ 1.98
UPF3A-209ENST00000492270 CUL9Q8IWT3 2517 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 INO80B-WBP1J3KQ70 363 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 K7ELQ4 463 aaPredicted RBP27.39■■□□□ 1.98
UPF3A-209ENST00000492270 TSPAN1O60635 241 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 MBTD1Q05BQ5 628 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 UBXN11Q5T124 520 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 IFNLR1Q8IU57 520 aaPredicted RBP27.39■■□□□ 1.98
UPF3A-209ENST00000492270 LRRC43Q8N309 656 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 MCPH1Q8NEM0 835 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 HLA-CQ95604 372 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 BHMT2Q9H2M3 363 aa27.39■■□□□ 1.98
UPF3A-209ENST00000492270 NSUN3Q9H649 340 aaKnown RBP27.39■■□□□ 1.98
UPF3A-209ENST00000492270 ERLIN2O94905 339 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 PBX3P40426 434 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 KCNQ1P51787 676 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 POU5F1BQ06416 359 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 NAALADL2Q58DX5 795 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 BSNDQ8WZ55 320 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 CPB2Q96IY4 423 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 POLD4Q9HCU8 107 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 COG5Q9UP83 839 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 PCDHB12Q9Y5F1 795 aa27.38■■□□□ 1.97
UPF3A-209ENST00000492270 TDRD15B5MCY1 1934 aaKnown RBP27.37■■□□□ 1.97
UPF3A-209ENST00000492270 VWA3AA6NCI4 1184 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 LRRIQ4A6NIV6 560 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 E9PMD0 336 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 CYP11B2P19099 503 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 RAB27AP51159 221 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 AMHR2Q16671 573 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 KRT79Q5XKE5 535 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 BRAPQ7Z569 592 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 POF1BQ8WVV4 589 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 AAASQ9NRG9 546 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 PCDHB2Q9Y5E7 798 aa27.37■■□□□ 1.97
UPF3A-209ENST00000492270 ZNF623O75123 536 aa27.36■■□□□ 1.97
UPF3A-209ENST00000492270 SKIP12755 728 aa27.36■■□□□ 1.97
UPF3A-209ENST00000492270 LAG3P18627 525 aa27.36■■□□□ 1.97
UPF3A-209ENST00000492270 IRS1P35568 1242 aa27.36■■□□□ 1.97
UPF3A-209ENST00000492270 KCNK18Q7Z418 384 aa27.36■■□□□ 1.97
UPF3A-209ENST00000492270 INTS4Q96HW7 963 aaKnown RBP27.36■■□□□ 1.97
UPF3A-209ENST00000492270 NFKBIZQ9BYH8 718 aa27.36■■□□□ 1.97
UPF3A-209ENST00000492270 UBE2ZQ9H832 354 aaPredicted RBP27.36■■□□□ 1.97
UPF3A-209ENST00000492270 PCDHGC5Q9Y5F6 944 aa27.36■■□□□ 1.97
UPF3A-209ENST00000492270 STK24Q9Y6E0 443 aa27.36■■□□□ 1.97
UPF3A-209ENST00000492270 B4GALT5O43286 388 aa27.35■■□□□ 1.97
UPF3A-209ENST00000492270 FGF18O76093 207 aa27.35■■□□□ 1.97
UPF3A-209ENST00000492270 PDCP20941 246 aa27.35■■□□□ 1.97
UPF3A-209ENST00000492270 SYT1P21579 422 aa27.35■■□□□ 1.97
UPF3A-209ENST00000492270 THNSL1Q8IYQ7 743 aa27.35■■□□□ 1.97
UPF3A-209ENST00000492270 EIF2AQ9BY44 585 aaKnown RBP27.35■■□□□ 1.97
UPF3A-209ENST00000492270 INPP5FQ9Y2H2 1132 aa27.35■■□□□ 1.97
UPF3A-209ENST00000492270 ARF4P18085 180 aaPredicted RBP27.34■■□□□ 1.97
UPF3A-209ENST00000492270 ZRSR1Q15695 479 aaKnown RBP27.34■■□□□ 1.97
UPF3A-209ENST00000492270 KCNT2Q6UVM3 1135 aa27.34■■□□□ 1.97
UPF3A-209ENST00000492270 AGMOQ6ZNB7 445 aa27.34■■□□□ 1.97
UPF3A-209ENST00000492270 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.33■■□□□ 1.97
UPF3A-209ENST00000492270 EYA4O95677 639 aa27.33■■□□□ 1.97
UPF3A-209ENST00000492270 AXLP30530 894 aa27.33■■□□□ 1.97
UPF3A-209ENST00000492270 GTF2F1P35269 517 aaKnown RBP eCLIP27.33■■□□□ 1.972e-6■■■■□ 26
UPF3A-209ENST00000492270 PCBP1Q15365 356 aaKnown RBP eCLIP27.33■■□□□ 1.97
UPF3A-209ENST00000492270 ARL6IP4Q66PJ3 421 aaKnown RBP27.33■■□□□ 1.97
UPF3A-209ENST00000492270 CDCA2Q69YH5 1023 aaPredicted RBP27.33■■□□□ 1.97
UPF3A-209ENST00000492270 NOTUMQ6P988 496 aa27.33■■□□□ 1.97
UPF3A-209ENST00000492270 MRPL10Q7Z7H8 261 aaKnown RBP27.33■■□□□ 1.97
UPF3A-209ENST00000492270 ADGRD2Q7Z7M1 963 aa27.33■■□□□ 1.97
UPF3A-209ENST00000492270 CDR2LQ86X02 465 aaPredicted RBP27.33■■□□□ 1.97
UPF3A-209ENST00000492270 SMG8Q8ND04 991 aaKnown RBP27.33■■□□□ 1.97
UPF3A-209ENST00000492270 PNMA5Q96PV4 448 aa27.33■■□□□ 1.97
UPF3A-209ENST00000492270 MRPL9Q9BYD2 267 aaKnown RBP27.33■■□□□ 1.97
UPF3A-209ENST00000492270 OFD1O75665 1012 aa27.32■■□□□ 1.96
UPF3A-209ENST00000492270 HYAL1Q12794 435 aa27.32■■□□□ 1.96
UPF3A-209ENST00000492270 RESTQ13127 1097 aa27.32■■□□□ 1.96
UPF3A-209ENST00000492270 SF3A1Q15459 793 aaKnown RBP27.32■■□□□ 1.96
UPF3A-209ENST00000492270 AAK1Q2M2I8 961 aa27.32■■□□□ 1.96
UPF3A-209ENST00000492270 GLB1LQ6UWU2 654 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms