RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
CDK9-204ENST00000491521 BMP2KQ9NSY1 1161 aaPredicted RBP15.17■□□□□ 0.02
CDK9-204ENST00000491521 HCSTQ9UBK5 93 aa15.17■□□□□ 0.02
CDK9-204ENST00000491521 CCDC39Q9UFE4 941 aa15.17■□□□□ 0.02
CDK9-204ENST00000491521 STK24Q9Y6E0 443 aa15.17■□□□□ 0.02
CDK9-204ENST00000491521 C5orf42Q9H799 3197 aa15.17■□□□□ 0.02
CDK9-204ENST00000491521 C9IYK1 514 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 C5orf67F2Z3F1 127 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 STBD1O95210 358 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 PFKFB1P16118 471 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 EIF4BP23588 611 aaKnown RBP15.16■□□□□ 0.02
CDK9-204ENST00000491521 CCT6AP40227 531 aaKnown RBP15.16■□□□□ 0.02
CDK9-204ENST00000491521 DNM2P50570 870 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 PSMC5P62195 406 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 EPHA7Q15375 998 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 TARBP2Q15633 366 aaKnown RBP15.16■□□□□ 0.02
CDK9-204ENST00000491521 B3GNT9Q6UX72 402 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 PDILTQ8N807 584 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 CALML4Q96GE6 196 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 NIFKQ9BYG3 293 aaKnown RBP15.16■□□□□ 0.02
CDK9-204ENST00000491521 CLDND1Q9NY35 253 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 KCNH3Q9ULD8 1083 aa15.16■□□□□ 0.02
CDK9-204ENST00000491521 MBD3O95983 291 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 ITGB1P05556 798 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 DARSP14868 501 aaKnown RBP15.15■□□□□ 0.02
CDK9-204ENST00000491521 ZSCAN20P17040 1043 aaPredicted RBP15.15■□□□□ 0.02
CDK9-204ENST00000491521 SYKP43405 635 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 QARSP47897 775 aaKnown RBP15.15■□□□□ 0.02
CDK9-204ENST00000491521 NDUFA8P51970 172 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 NPEPPSP55786 919 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 CYP4A11Q02928 519 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 SPIRE1Q08AE8 756 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 CLUL1Q15846 466 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 ANO5Q75V66 913 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 RHPN2Q8IUC4 686 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 KLHL23Q8NBE8 558 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 NLRP4Q96MN2 994 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 PLIN2Q99541 437 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 EIF2AK1Q9BQI3 630 aaKnown RBP15.15■□□□□ 0.02
CDK9-204ENST00000491521 PLVAPQ9BX97 442 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 GOLPH3LQ9H4A5 285 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
CDK9-204ENST00000491521 RGL1Q9NZL6 768 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
CDK9-204ENST00000491521 PLAGL2Q9UPG8 496 aa15.15■□□□□ 0.02
CDK9-204ENST00000491521 A0A087WZ62 844 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 LIG1P18858 919 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 DNAJB1P25685 340 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 GTF2F1P35269 517 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDK9-204ENST00000491521 CTTNQ14247 550 aaKnown RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 DSC3Q14574 896 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 KARSQ15046 597 aaKnown RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 RRAGBQ5VZM2 374 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 HAUS3Q68CZ6 603 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 PTCRAQ6ISU1 281 aaPredicted RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 KSR1Q8IVT5 923 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 TPH2Q8IWU9 490 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 DYDC2Q96IM9 177 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 CEP170P1Q96L14 293 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 FDXACB1Q9BRP7 624 aaPredicted RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 LXNQ9BS40 222 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 GCOM2Q9BZD3 368 aaPredicted RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 CCSER1Q9C0I3 900 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 LMAN2LQ9H0V9 348 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 CYP26B1Q9NR63 512 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 TMEM161AQ9NX61 479 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 WRAP73Q9P2S5 460 aaPredicted RBP15.14■□□□□ 0.01
CDK9-204ENST00000491521 PCDHB12Q9Y5F1 795 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 PCDHGC5Q9Y5F6 944 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 PLXNA4Q9HCM2 1894 aa15.14■□□□□ 0.01
CDK9-204ENST00000491521 MAFO75444 373 aaPredicted RBP15.13■□□□□ 0.01
CDK9-204ENST00000491521 P4HBP07237 508 aaKnown RBP15.13■□□□□ 0.01
CDK9-204ENST00000491521 POLGP54098 1239 aaPredicted RBP15.13■□□□□ 0.01
CDK9-204ENST00000491521 FAM160A1Q05DH4 1040 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 HYAL1Q12794 435 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 LEXMQ3ZCV2 418 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 LONRF3Q496Y0 759 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 THNSL1Q8IYQ7 743 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 ABI1Q8IZP0 508 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.13■□□□□ 0.01
CDK9-204ENST00000491521 SPPL3Q8TCT6 385 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 GPT2Q8TD30 523 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 POF1BQ8WVV4 589 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 DHX58Q96C10 678 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 PABPC5Q96DU9 382 aaKnown RBP15.13■□□□□ 0.01
CDK9-204ENST00000491521 CEP89Q96ST8 783 aa15.13■□□□□ 0.01
CDK9-204ENST00000491521 PYM1Q9BRP8 204 aaKnown RBP15.13■□□□□ 0.01
CDK9-204ENST00000491521 MMTAG2Q9BU76 263 aaKnown RBP15.13■□□□□ 0.01
CDK9-204ENST00000491521 TYW1Q9NV66 732 aaKnown RBP15.13■□□□□ 0.01
CDK9-204ENST00000491521 ZBTB39O15060 712 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 TRAK2O60296 914 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 DKC1O60832 514 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDK9-204ENST00000491521 KINO60870 393 aaKnown RBP15.12■□□□□ 0.01
CDK9-204ENST00000491521 MED24O75448 989 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 NR1I2O75469 434 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 SLITRK3O94933 977 aa15.12■□□□□ 0.01
CDK9-204ENST00000491521 ZNF202O95125 648 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms