RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 COL19A1Q14993 1142 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 CTC1Q2NKJ3 1217 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 FERMT3Q86UX7 667 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 KSR1Q8IVT5 923 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 MCPH1Q8NEM0 835 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 FBXO18Q8NFZ0 1043 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 CCDC51Q96ER9 411 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 HSD17B14Q9BPX1 270 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 TRIM6Q9C030 488 aaPredicted RBP18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 TUFT1Q9NNX1 390 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 FAM205CA6NFA0 338 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 INO80B-WBP1J3KQ70 363 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 ZNF623O75123 536 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 OR52Z1P0C646 297 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 SPIRE1Q08AE8 756 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 GIT2Q14161 759 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 NOMO2Q5JPE7 1267 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 NOTUMQ6P988 496 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 NOSTRINQ8IVI9 506 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 TCF25Q9BQ70 676 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 CWH43Q9H720 699 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 BMP2KQ9NSY1 1161 aaPredicted RBP18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 AGPAT5Q9NUQ2 364 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 INPP5FQ9Y2H2 1132 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 CNTNAP2Q9UHC6 1331 aa18.42■□□□□ 0.54
PDLIM2-217ENST00000491330 RALGAPA2Q2PPJ7 1873 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 RBAK-RBAKDNI3L0D1 243 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 IL9P15248 144 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 MUTP22033 750 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 TECP42680 631 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 SMC1AQ14683 1233 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 ZNF174Q15697 407 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 TMEM132AQ24JP5 1023 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 TTC38Q5R3I4 469 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 ZNF598Q86UK7 904 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 ZBTB8OSQ8IWT0 167 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 TBC1D32Q96NH3 1257 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 MTMR9Q96QG7 549 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 IFT122Q9HBG6 1241 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 PCDHB2Q9Y5E7 798 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
PDLIM2-217ENST00000491330 ZC3H11AO75152 810 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 DNAJB1P25685 340 aa18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 CAMK1Q14012 370 aa18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 CLUL1Q15846 466 aa18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 TMEM31Q5JXX7 168 aa18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 PLPP4Q5VZY2 271 aa18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 ADHFE1Q8IWW8 467 aa18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 POLR3CQ9BUI4 534 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 RSAD1Q9HA92 442 aa18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 WRAP73Q9P2S5 460 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-217ENST00000491330 ARHGEF35A5YM69 484 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 H3BQV1 296 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 LAD1O00515 517 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 ALDH2P05091 517 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 ITGA4P13612 1032 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 IRS1P35568 1242 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 RARRES1P49788 294 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 BCAR1P56945 870 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 PPP2R5AQ15172 486 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 SMAD2Q15796 467 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 CLLU1OSQ5K130 101 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 APBB1IPQ7Z5R6 666 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 ZNF579Q8NAF0 562 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 C2orf40Q9H1Z8 148 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 DBR1Q9UK59 544 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 A0A0C4DFX4 3053 aa18.39■□□□□ 0.53
PDLIM2-217ENST00000491330 TTC28Q96AY4 2481 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 POTEMA6NI47 508 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 MBTPS2O43462 519 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 USO1O60763 962 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 HOXB8P17481 243 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 RPA1P27694 616 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 PTENP60484 403 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 COASYQ13057 564 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 DUSP6Q16828 381 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 MCTP1Q6DN14 999 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 ELMSAN1Q6PJG2 1045 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 LRRC55Q6ZSA7 311 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 SLC39A11Q8N1S5 342 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 PIGOQ8TEQ8 1089 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 CASP10Q92851 521 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 GBP3Q9H0R5 595 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 LRWD1Q9UFC0 647 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 SSX2IPQ9Y2D8 614 aa18.38■□□□□ 0.53
PDLIM2-217ENST00000491330 EVPLQ92817 2033 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 LRRIQ4A6NIV6 560 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 SPDYE4A6NLX3 237 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 PER2O15055 1255 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 CXCL14O95715 111 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 LTBRP36941 435 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 ERVFC1P60507 584 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 ST3GAL1Q11201 340 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 PDIA5Q14554 519 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 LONRF3Q496Y0 759 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 CES5AQ6NT32 575 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 CATSPER3Q86XQ3 398 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 IFT74Q96LB3 600 aa18.37■□□□□ 0.53
PDLIM2-217ENST00000491330 NFKBIZQ9BYH8 718 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms