RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ENOX2Q16206 610 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 RAD9BQ6WBX8 426 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 PLPPR4Q7Z2D5 763 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 DEPTORQ8TB45 409 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 USP6NLQ92738 828 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 LSM14BQ9BX40 385 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 TMEM206Q9H813 350 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 SLC5A4Q9NY91 659 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 ERAP1Q9NZ08 941 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
SMPD4-219ENST00000491128 LUC7L2Q9Y383 392 aaKnown RBP15.24■□□□□ 0.03
SMPD4-219ENST00000491128 H3BRB1 525 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 GNA14O95837 355 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 MMP3P08254 477 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 EFCAB12Q6NXP0 572 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 GJB7Q6PEY0 223 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 PLEKHO2Q8TD55 490 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 CCDC127Q96BQ5 260 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 BORCS6Q96GS4 357 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 ERGIC2Q96RQ1 377 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 TIPINQ9BVW5 301 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 TTYH3Q9C0H2 523 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 TUT1Q9H6E5 874 aaKnown RBP15.23■□□□□ 0.03
SMPD4-219ENST00000491128 DMAC2Q9NW81 257 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 EMSYQ7Z589 1322 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 RGS2P41220 211 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 FLT3LGP49771 235 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 PRKCZQ05513 592 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 CBWD6Q4V339 395 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 CBWD3Q5JTY5 395 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 CBWD5Q5RIA9 395 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 FRMD5Q7Z6J6 570 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 MAP4K3Q8IVH8 894 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 RNF149Q8NC42 400 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 POMGNT1Q8WZA1 660 aa15.23■□□□□ 0.03
SMPD4-219ENST00000491128 NTPCRQ9BSD7 190 aaKnown RBP15.23■□□□□ 0.03
SMPD4-219ENST00000491128 TARS2Q9BW92 718 aaKnown RBP15.23■□□□□ 0.03
SMPD4-219ENST00000491128 ZSWIM8A7E2V4 1837 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 ADRB2P07550 413 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 PLEKP08567 350 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-219ENST00000491128 TPM1P09493 284 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 LAMTOR4Q0VGL1 99 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 ARHGAP28Q9P2N2 729 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 ANKFY1Q9P2R3 1169 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 SUCLA2Q9P2R7 463 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-219ENST00000491128 TFR2Q9UP52 801 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 K7ERI5 159 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 VTNP04004 478 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 YY1P25490 414 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 KLRC1P26715 233 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 MARSP56192 900 aaKnown RBP15.22■□□□□ 0.03
SMPD4-219ENST00000491128 POLR2FP61218 127 aaKnown RBP15.22■□□□□ 0.03
SMPD4-219ENST00000491128 LACTBP83111 547 aaPredicted RBP15.22■□□□□ 0.03
SMPD4-219ENST00000491128 ARID5AQ03989 594 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 TMEM62Q0P6H9 643 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 NOGQ13253 232 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 ZBTB41Q5SVQ8 909 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 WDR59Q6PJI9 974 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 FOXR2Q6PJQ5 311 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 RRAGAQ7L523 313 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 CNGA4Q8IV77 575 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 TRPV1Q8NER1 839 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 SPIRE2Q8WWL2 714 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 TRIB2Q92519 343 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 HAPLN2Q9GZV7 340 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 ZCCHC17Q9NP64 241 aaKnown RBP15.22■□□□□ 0.03
SMPD4-219ENST00000491128 SETD4Q9NVD3 440 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 CAPN11Q9UMQ6 739 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 GINS2Q9Y248 185 aa15.22■□□□□ 0.03
SMPD4-219ENST00000491128 LOC102724159A0A0B4J2E5 919 aa15.21■□□□□ 0.03
SMPD4-219ENST00000491128 NOL4O94818 638 aa15.21■□□□□ 0.03
SMPD4-219ENST00000491128 AFPP02771 609 aaKnown RBP15.21■□□□□ 0.03
SMPD4-219ENST00000491128 PNMA6AP0CW24 399 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-219ENST00000491128 ELNP15502 786 aa15.21■□□□□ 0.03
SMPD4-219ENST00000491128 ACOT2P49753 483 aa15.21■□□□□ 0.03
SMPD4-219ENST00000491128 PWP2Q15269 919 aaKnown RBP15.21■□□□□ 0.03
SMPD4-219ENST00000491128 LMBRD2Q68DH5 695 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-219ENST00000491128 IQSEC1Q6DN90 963 aa15.21■□□□□ 0.03
SMPD4-219ENST00000491128 CCAR2Q8N163 923 aaKnown RBP15.21■□□□□ 0.03
SMPD4-219ENST00000491128 FAM167AQ96KS9 214 aa15.21■□□□□ 0.03
SMPD4-219ENST00000491128 FAM213AQ9BRX8 229 aa15.21■□□□□ 0.03
SMPD4-219ENST00000491128 TOPORSQ9NS56 1045 aaPredicted RBP15.21■□□□□ 0.03
SMPD4-219ENST00000491128 UBE4BO95155 1302 aa15.21■□□□□ 0.03
SMPD4-219ENST00000491128 PPFIA4O75335 1185 aa15.21■□□□□ 0.02
SMPD4-219ENST00000491128 RFC5P40937 340 aa15.21■□□□□ 0.02
SMPD4-219ENST00000491128 MATR3P43243 847 aaKnown RBP eCLIP15.21■□□□□ 0.02
SMPD4-219ENST00000491128 GCLMP48507 274 aa15.21■□□□□ 0.02
SMPD4-219ENST00000491128 XXYLT1Q8NBI6 393 aa15.21■□□□□ 0.02
SMPD4-219ENST00000491128 ACRBPQ8NEB7 543 aa15.21■□□□□ 0.02
SMPD4-219ENST00000491128 PANX2Q96RD6 677 aa15.21■□□□□ 0.02
SMPD4-219ENST00000491128 APBA2Q99767 749 aa15.21■□□□□ 0.02
SMPD4-219ENST00000491128 ST6GALNAC4Q9H4F1 302 aa15.21■□□□□ 0.02
SMPD4-219ENST00000491128 GNEQ9Y223 722 aaKnown RBP15.21■□□□□ 0.02
SMPD4-219ENST00000491128 MYADML2A6NDP7 307 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 LRRC53A6NM62 1247 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 HBP1O60381 514 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 ABL1P00519 1130 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 HOXC6P09630 235 aa15.2■□□□□ 0.02
SMPD4-219ENST00000491128 LIG4P49917 911 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms