RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 FAM189BP81408 668 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 MCM6Q14566 821 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 KCNN1Q92952 543 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 ADAM2Q99965 735 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 TTYH1Q9H313 450 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-217ENST00000488801 C17orf75Q9HAS0 396 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 CHST12Q9NRB3 414 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 ARHGEF15O94989 841 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 MYOGP15173 224 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 HOXA11P31270 313 aaPredicted RBP20.64■□□□□ 0.89
PTCD3-217ENST00000488801 PPP2R5AQ15172 486 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 FAM187BQ17R55 369 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 RESP18Q5W5W9 173 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 SLC24A5Q71RS6 500 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 NPAS4Q8IUM7 802 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 TIFAQ96CG3 184 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 ZNF689Q96CS4 500 aaPredicted RBP20.64■□□□□ 0.89
PTCD3-217ENST00000488801 DRC1Q96MC2 740 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 ODF2LQ9ULJ1 636 aa20.64■□□□□ 0.89
PTCD3-217ENST00000488801 TSPAN1O60635 241 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 ATF7P17544 494 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-217ENST00000488801 ZNF131P52739 623 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 CCDC73Q6ZRK6 1079 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 CATSPER4Q7RTX7 472 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 ZNF598Q86UK7 904 aaKnown RBP20.63■□□□□ 0.89
PTCD3-217ENST00000488801 GPBP1Q86WP2 473 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 SPATA32Q96LK8 384 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 RAD9AQ99638 391 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 REEP2Q9BRK0 252 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 SCAND2PQ9GZW5 306 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-217ENST00000488801 FZD8Q9H461 694 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 ELAC1Q9H777 363 aaKnown RBP20.63■□□□□ 0.89
PTCD3-217ENST00000488801 POLD4Q9HCU8 107 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 ARHGAP28Q9P2N2 729 aa20.63■□□□□ 0.89
PTCD3-217ENST00000488801 DENND3A2RUS2 1198 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 LCHNA4D1U4 455 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 LRRIQ4A6NIV6 560 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 TLL1O43897 1013 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 EDN1P05305 212 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 SSBP05455 408 aaKnown RBP eCLIP20.62■□□□□ 0.89
PTCD3-217ENST00000488801 ME1P48163 572 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 RRAGBQ5VZM2 374 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 RASSF8Q8NHQ8 419 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 PRIMPOLQ96LW4 560 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 C2orf40Q9H1Z8 148 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 NKX2-4Q9H2Z4 354 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 RNF19AQ9NV58 838 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 DACT1Q9NYF0 836 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 MSRAQ9UJ68 235 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 INSL6Q9Y581 213 aa20.62■□□□□ 0.89
PTCD3-217ENST00000488801 CNTNAP2Q9UHC6 1331 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 NPHP3-ACAD11A0A0J9YXS1 232 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 A0A0U1RQF3 1178 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 FAM237AA0A1B0GTK4 181 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 DGKIO75912 1065 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 CA3P07451 260 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 LINC00271P0C7V0 271 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 AXLP30530 894 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 NPTX2P47972 431 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 GIT2Q14161 759 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 UBXN11Q5T124 520 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 ADALQ6DHV7 355 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 SPIRE2Q8WWL2 714 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 IFT74Q96LB3 600 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 NTPCRQ9BSD7 190 aaKnown RBP20.61■□□□□ 0.89
PTCD3-217ENST00000488801 KIFC3Q9BVG8 833 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 TMEM161AQ9NX61 479 aa20.61■□□□□ 0.89
PTCD3-217ENST00000488801 PIN4Q9Y237 131 aaKnown RBP20.61■□□□□ 0.89
PTCD3-217ENST00000488801 PHLPP2Q6ZVD8 1323 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 PRRC2BQ5JSZ5 2229 aaKnown RBP20.6■□□□□ 0.89
PTCD3-217ENST00000488801 INO80B-WBP1J3KQ70 363 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 PLS3P13797 630 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 ZSCAN20P17040 1043 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-217ENST00000488801 ARF4P18085 180 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-217ENST00000488801 STAT6P42226 847 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 PEX3P56589 373 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 DMP1Q13316 513 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-217ENST00000488801 TAS1R3Q7RTX0 852 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 ECHDC2Q86YB7 292 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 ZBTB8OSQ8IWT0 167 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 DNAJC19Q96DA6 116 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 CCDC51Q96ER9 411 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 FIZ1Q96SL8 496 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 CUEDC2Q9H467 287 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 PRMT7Q9NVM4 692 aaPredicted RBP20.6■□□□□ 0.89
PTCD3-217ENST00000488801 KBTBD4Q9NVX7 518 aa20.6■□□□□ 0.89
PTCD3-217ENST00000488801 MYO7AQ13402 2215 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 MYMKA6NI61 221 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 ZNF623O75123 536 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 ERLIN2O94905 339 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 UPP2O95045 317 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 STAG3L1P0CL83 205 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 NCLP19338 710 aaKnown RBP20.59■□□□□ 0.89
PTCD3-217ENST00000488801 EFNA5P52803 228 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 CACNB1Q02641 598 aaPredicted RBP20.59■□□□□ 0.89
PTCD3-217ENST00000488801 TAP1Q03518 808 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 RAD51AP2Q09MP3 1159 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 ZNF697Q5TEC3 545 aa20.59■□□□□ 0.89
PTCD3-217ENST00000488801 FAM117BQ6P1L5 589 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms