RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PLEKHG6Q3KR16 790 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 ODR4Q5SWX8 454 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 ARHGEF18Q6ZSZ5 1173 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 GAREM2Q75VX8 874 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 OR14K1Q8NGZ2 314 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 NKD2Q969F2 451 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 UIMC1Q96RL1 719 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 SOX7Q9BT81 388 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 OSBPL6Q9BZF3 934 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 IFT122Q9HBG6 1241 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 INVSQ9Y283 1065 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 SPEF1Q9Y4P9 236 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 RBM8AQ9Y5S9 174 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 NCANO14594 1321 aa5.16□□□□□ -1.58
ECHDC1-217ENST00000488087 KLHL33A6NCF5 533 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 OTOL1A6NHN0 477 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 TRIM75PA6NK02 468 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 PRRG2O14669 202 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 ARHGAP6O43182 974 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 CNR2P34972 360 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 CD69Q07108 199 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 PCBP2Q15366 365 aaKnown RBP eCLIP5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 ZNF827Q17R98 1081 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 MUM1Q2TAK8 710 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 KRT40Q6A162 431 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 KCNK18Q7Z418 384 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 SLC41A1Q8IVJ1 513 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 LPPQ93052 612 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 CHMP4CQ96CF2 233 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 SLC2A13Q96QE2 648 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 FDXACB1Q9BRP7 624 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 ACE2Q9BYF1 805 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 PARD6AQ9NPB6 346 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 AASDHPPTQ9NRN7 309 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 ZNF536O15090 1300 aa5.15□□□□□ -1.59
ECHDC1-217ENST00000488087 PRAMEF4O60810 478 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 SEC24DO94855 1032 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 SNUPNO95149 360 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 LY86O95711 162 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 RBP3P10745 1247 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 MTNR1BP49286 362 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 RAC3P60763 192 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 PPP2CBP62714 309 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 PPP2CAP67775 309 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 ATP2C1P98194 919 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 TCIRG1Q13488 830 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 TTF1Q15361 905 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 SURF1Q15526 300 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 TBR1Q16650 682 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 RNF151Q2KHN1 245 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 MBNL2Q5VZF2 373 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 LILRA6Q6PI73 481 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 PPM1NQ8N819 430 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 PLA2G15Q8NCC3 412 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 TSPEARQ8WU66 669 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 FATE1Q969F0 183 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 SLC7A6OSQ96CW6 309 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 ADAM7Q9H2U9 754 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 C12orf65Q9H3J6 166 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 C14orf93Q9H972 538 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 PUF60Q9UHX1 559 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 CTDP1Q9Y5B0 961 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 SLC4A7Q9Y6M7 1214 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 DUSP10Q9Y6W6 482 aa5.14□□□□□ -1.59
ECHDC1-217ENST00000488087 C2orf78A6NCI8 922 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 B8ZZF3 427 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 LAMTOR5O43504 91 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 GAAP10253 952 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 AGXTP21549 392 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 BPIFB4P59827 614 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 UBXN11Q5T124 520 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 EFCAB2Q5VUJ9 269 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 FRMD5Q7Z6J6 570 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 CLEC14AQ86T13 490 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 UNC5BQ8IZJ1 945 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 ANKRD53Q8N9V6 530 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 GLB1L3Q8NCI6 653 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 PPP1R14CQ8TAE6 165 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 SSH1Q8WYL5 1049 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 JADE3Q92613 823 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 PAWRQ96IZ0 340 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 LRRC37BQ96QE4 947 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 LMF1Q96S06 567 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 SLC13A1Q9BZW2 595 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 XYLT2Q9H1B5 865 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 METTL14Q9HCE5 456 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 LUC7L2Q9Y383 392 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 PCDHGA2Q9Y5H1 932 aa5.13□□□□□ -1.59
ECHDC1-217ENST00000488087 FZD9O00144 591 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 PCDHGA12O60330 932 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 ALDH1A2O94788 518 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 TOX4O94842 621 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 CNOT4O95628 575 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 INHBBP09529 407 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 ACAP1Q15027 740 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 ADRM1Q16186 407 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 ANO4Q32M45 955 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 MUM1L1Q5H9M0 696 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 FAM180AQ6UWF9 173 aa5.12□□□□□ -1.59
ECHDC1-217ENST00000488087 BTNL9Q6UXG8 535 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms