RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ERVK-21P61565 698 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 DUSP8Q13202 625 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 TOP3AQ13472 1001 aaPredicted RBP3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 NFYCQ13952 458 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 PDCD1Q15116 288 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 RNF219Q5W0B1 726 aaPredicted RBP3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 LRSAM1Q6UWE0 723 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 ADGRE4PQ86SQ3 457 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 ZNF496Q96IT1 587 aaPredicted RBP3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 GBP4Q96PP9 640 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 TTPALQ9BTX7 342 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 AMNQ9BXJ7 453 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 ASPSCR1Q9BZE9 553 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 NELFAQ9H3P2 528 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 TLR9Q9NR96 1032 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 TOPORSQ9NS56 1045 aaPredicted RBP3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 GIT1Q9Y2X7 761 aa3.97□□□□□ -1.77
R3HDM1-219ENST00000488035 PRAMEF22A3QJZ6 481 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 GOLGA6L22H0YM25 854 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 FOXN1O15353 648 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 IL18BPO95998 194 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 CPEP16870 476 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 MSX2P35548 267 aaPredicted RBP3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 IL12RB1P42701 662 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 FNTBP49356 437 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 HERVK_113P62684 666 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 PHC1P78364 1004 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 OCRLQ01968 901 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 FOXL1Q12952 345 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 PLEKHG6Q3KR16 790 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 IQSEC1Q6DN90 963 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 NECAB2Q7Z6G3 386 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 C11orf74Q86VG3 221 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 SGMS1Q86VZ5 419 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 RAVER1Q8IY67 606 aaKnown RBP3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 CBARPQ8N350 705 aaPredicted RBP3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 MTMR8Q96EF0 704 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 SMAD5Q99717 465 aaKnown RBP3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 TACO1Q9BSH4 297 aaKnown RBP3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 POFUT1Q9H488 388 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 ACSS2Q9NR19 701 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 PLA2G3Q9NZ20 509 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 MSRAQ9UJ68 235 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 TRHDEQ9UKU6 1024 aa3.96□□□□□ -1.78
R3HDM1-219ENST00000488035 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ELL2O00472 640 aaPredicted RBP3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 GABRDO14764 452 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ARHGAP6O43182 974 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 KDM1AO60341 852 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 PRLP01236 227 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 CYP17A1P05093 508 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 PTGS1P23219 599 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 IARSP41252 1262 aaKnown RBP3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ETV4P43268 484 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 RGS3P49796 1198 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 MRPS21P82921 87 aaKnown RBP3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ITKQ08881 620 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 LRRC32Q14392 662 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 MYBPC3Q14896 1274 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 EPHA7Q15375 998 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ABCB5Q2M3G0 1257 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ZBTB41Q5SVQ8 909 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 GPR158Q5T848 1215 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 LAIR1Q6GTX8 287 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 UNQ6494/PRO21346Q6UXR6 183 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 TMPRSS6Q8IU80 811 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ZNF610Q8N9Z0 462 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 HIPK4Q8NE63 616 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ZDHHC5Q9C0B5 715 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 PRDM12Q9H4Q4 367 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 SLC2A4RGQ9NR83 387 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 C14orf119Q9NWQ9 140 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 CEP72Q9P209 647 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 KLHL42Q9P2K6 505 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ARHGAP28Q9P2N2 729 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 THRAP3Q9Y2W1 955 aaKnown RBP3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ASB1Q9Y576 335 aa3.95□□□□□ -1.78
R3HDM1-219ENST00000488035 ALG1L2C9J202 215 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 FZD9O00144 591 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 MATN2O00339 956 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 H2AFYO75367 372 aaKnown RBP3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 ULK1O75385 1050 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 RHOBTB3O94955 611 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 CLEC2LP0C7M8 214 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 LSP1P33241 339 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 RRADP55042 308 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 SESN3P58005 492 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 EXOSC10Q01780 885 aaKnown RBP3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 SLC6A3Q01959 620 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 ALDH6A1Q02252 535 aaKnown RBP3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 MOGSQ13724 837 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 INAVAQ3KP66 663 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 RASSF3Q86WH2 238 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 PASD1Q8IV76 773 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 AHCYL2Q96HN2 611 aaKnown RBP3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 MYL10Q9BUA6 226 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 PUS7LQ9H0K6 701 aaKnown RBP3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 INCENPQ9NQS7 918 aa3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 TYW1Q9NV66 732 aaKnown RBP3.94□□□□□ -1.78
R3HDM1-219ENST00000488035 FBXO10Q9UK96 956 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms