RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 VEGFAP15692 232 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-217ENST00000487825 PDE6AP16499 860 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 DNM2P50570 870 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 ST5P78524 1137 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 EP400NLQ6ZTU2 488 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 PTRH1Q86Y79 214 aaKnown RBP6.54□□□□□ -1.36
BRCA1-217ENST00000487825 KCNH5Q8NCM2 988 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 LOXL4Q96JB6 756 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 BARX1Q9HBU1 254 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-217ENST00000487825 RIC8BQ9NVN3 520 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 SMPD4Q9NXE4 827 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 RNF181Q9P0P0 153 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 CNOT11Q9UKZ1 510 aaKnown RBP6.54□□□□□ -1.36
BRCA1-217ENST00000487825 CBLCQ9ULV8 474 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 SRPK3Q9UPE1 567 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 SCN4AP35499 1836 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 A0A0G2JLW4 131 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-217ENST00000487825 ZNF839A8K0R7 811 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 ARVCFO00192 962 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 KCNK3O14649 394 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 LAMTOR5O43504 91 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 B4GALT4O60513 344 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 KLHL18O94889 574 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 HMGB2P26583 209 aaKnown RBP6.53□□□□□ -1.36
BRCA1-217ENST00000487825 MAGEA10P43363 369 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-217ENST00000487825 JAM2P57087 298 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 NFATC3Q12968 1075 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 GPR19Q15760 415 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 SMAD2Q15796 467 aaKnown RBP6.53□□□□□ -1.36
BRCA1-217ENST00000487825 GLB1LQ6UWU2 654 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 GGNQ86UU5 652 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 KLHL36Q8N4N3 616 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 IGDCC4Q8TDY8 1250 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 TACO1Q9BSH4 297 aaKnown RBP6.53□□□□□ -1.36
BRCA1-217ENST00000487825 SLC39A2Q9NP94 309 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 NDOR1Q9UHB4 597 aa6.53□□□□□ -1.36
BRCA1-217ENST00000487825 FAM90A27PA6NNH2 459 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 MAN2B1O00754 1011 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 WNT9AO14904 365 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 IL18BPO95998 194 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 KNG1P01042 644 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 AMY2AP04746 511 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 PTPN1P18031 435 aaKnown RBP6.52□□□□□ -1.37
BRCA1-217ENST00000487825 AMY2BP19961 511 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 CRY1Q16526 586 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 LONRF2Q1L5Z9 754 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 DBX2Q6ZNG2 339 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 C16orf59Q7L2K0 433 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 LRP10Q7Z4F1 713 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 PLEKHH3Q7Z736 793 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 ZC3H7AQ8IWR0 971 aaKnown RBP6.52□□□□□ -1.37
BRCA1-217ENST00000487825 NLGN4XQ8N0W4 816 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 KISS1RQ969F8 398 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-217ENST00000487825 SLC52A2Q9HAB3 445 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 JADE2Q9NQC1 790 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 PPP4R1LQ9P1A2 415 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 ADAMTSL1Q8N6G6 1762 aa6.52□□□□□ -1.37
BRCA1-217ENST00000487825 COL5A3P25940 1745 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-217ENST00000487825 CCDC66A2RUB6 948 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 GLTPD2A6NH11 291 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 MMP10P09238 476 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 INSRRP14616 1297 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 DPEP1P16444 411 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 NAT1P18440 290 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 KCNA3P22001 575 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 DBPQ10586 325 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-217ENST00000487825 SURF1Q15526 300 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 PKN3Q6P5Z2 889 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 SMIM5Q71RC9 77 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 C8orf49Q96NF6 230 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 DNAJC2Q99543 621 aaKnown RBP6.51□□□□□ -1.37
BRCA1-217ENST00000487825 GPR20Q99678 358 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 KCND1Q9NSA2 647 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 ATP23Q9Y6H3 246 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 PALLDQ8WX93 1383 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 FER1L6Q2WGJ9 1857 aa6.51□□□□□ -1.37
BRCA1-217ENST00000487825 TRPM7Q96QT4 1865 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 ZNF831Q5JPB2 1677 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 ADAMTS7Q9UKP4 1686 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 NPEPPSL1A6NEC2 478 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 GSTA4O15217 222 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 PPP2CBP62714 309 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 PPP2CAP67775 309 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 SF3A1Q15459 793 aaKnown RBP6.5□□□□□ -1.37
BRCA1-217ENST00000487825 FAM47CQ5HY64 1035 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 ARHGEF18Q6ZSZ5 1173 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 Q6ZUG5 572 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 GPR155Q7Z3F1 870 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 CISD2Q8N5K1 135 aaKnown RBP6.5□□□□□ -1.37
BRCA1-217ENST00000487825 SLC7A14Q8TBB6 771 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 SAMD11Q96NU1 681 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 PTPN18Q99952 460 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 SSBP3Q9BWW4 388 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-217ENST00000487825 ARHGAP28Q9P2N2 729 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 ST6GALNAC2Q9UJ37 374 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 ADAM29Q9UKF5 820 aa6.5□□□□□ -1.37
BRCA1-217ENST00000487825 AFDNP55196 1824 aaKnown RBP6.5□□□□□ -1.37
BRCA1-217ENST00000487825 PASKQ96RG2 1323 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms