RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 MAMDC2Q7Z304 686 aaPredicted RBP3.92□□□□□ -1.78
USP9X-208ENST00000487625 ASB15Q8WXK1 588 aa3.92□□□□□ -1.78
USP9X-208ENST00000487625 ZFYVE21Q9BQ24 234 aa3.92□□□□□ -1.78
USP9X-208ENST00000487625 NCDNQ9UBB6 729 aa3.92□□□□□ -1.78
USP9X-208ENST00000487625 SAE1Q9UBE0 346 aaPredicted RBP3.92□□□□□ -1.78
USP9X-208ENST00000487625 ARPP21Q9UBL0 812 aaPredicted RBP3.92□□□□□ -1.78
USP9X-208ENST00000487625 CCDC187A0A096LP49 1063 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 PRAMEF22A3QJZ6 481 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 LEFTY2O00292 366 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 CCT4P50991 539 aaKnown RBP3.91□□□□□ -1.78
USP9X-208ENST00000487625 NPEPPSP55786 919 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 ANTXR2P58335 489 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 PPP2R2AP63151 447 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 RACK1P63244 317 aaKnown RBP3.91□□□□□ -1.78
USP9X-208ENST00000487625 SSBP2P81877 361 aaPredicted RBP3.91□□□□□ -1.78
USP9X-208ENST00000487625 NTRK3Q16288 839 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 C6orf15Q6UXA7 325 aaPredicted RBP3.91□□□□□ -1.78
USP9X-208ENST00000487625 CMTM4Q8IZR5 234 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 DCLRE1CQ96SD1 692 aaKnown RBP3.91□□□□□ -1.78
USP9X-208ENST00000487625 CPPED1Q9BRF8 314 aaPredicted RBP3.91□□□□□ -1.78
USP9X-208ENST00000487625 FOXJ2Q9P0K8 574 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.91□□□□□ -1.78
USP9X-208ENST00000487625 ZNF804BA4D1E1 1349 aa3.91□□□□□ -1.78
USP9X-208ENST00000487625 B2RBV5 119 aa3.9□□□□□ -1.79
USP9X-208ENST00000487625 DDX6P26196 483 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP9X-208ENST00000487625 PAK2Q13177 524 aa3.9□□□□□ -1.79
USP9X-208ENST00000487625 PLXDC1Q8IUK5 500 aa3.9□□□□□ -1.79
USP9X-208ENST00000487625 IFNL3Q8IZI9 196 aa3.9□□□□□ -1.79
USP9X-208ENST00000487625 ALOXE3Q9BYJ1 711 aa3.9□□□□□ -1.79
USP9X-208ENST00000487625 BCL11AQ9H165 835 aa3.9□□□□□ -1.79
USP9X-208ENST00000487625 METTL5Q9NRN9 209 aaKnown RBP3.9□□□□□ -1.79
USP9X-208ENST00000487625 KCNK3O14649 394 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 ITGAMP11215 1152 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 ZSCAN20P17040 1043 aaPredicted RBP3.89□□□□□ -1.79
USP9X-208ENST00000487625 SCAPQ12770 1279 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 KIAA1614Q5VZ46 1190 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 OSTM1Q86WC4 334 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 SLC7A14Q8TBB6 771 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 PDCD2LQ9BRP1 358 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 VPS33BQ9H267 617 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 DDX41Q9UJV9 622 aaKnown RBP3.89□□□□□ -1.79
USP9X-208ENST00000487625 ZNF521Q96K83 1311 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 CACNA1IQ9P0X4 2223 aa3.89□□□□□ -1.79
USP9X-208ENST00000487625 RASSF10A6NK89 507 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 MARCH11A6NNE9 402 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 CLASP2O75122 1294 aaKnown RBP3.88□□□□□ -1.79
USP9X-208ENST00000487625 RECKO95980 971 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 CFBP00751 764 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 JAM2P57087 298 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 RNASE9P60153 205 aaKnown RBP3.88□□□□□ -1.79
USP9X-208ENST00000487625 KLF9Q13886 244 aaPredicted RBP3.88□□□□□ -1.79
USP9X-208ENST00000487625 TM4SF20Q53R12 229 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 PIK3R6Q5UE93 754 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 STYK1Q6J9G0 422 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 PTF1AQ7RTS3 328 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 OR5AN1Q8NGI8 311 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 CALML6Q8TD86 181 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 GBP4Q96PP9 640 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 LSM14BQ9BX40 385 aaKnown RBP3.88□□□□□ -1.79
USP9X-208ENST00000487625 ASB6Q9NWX5 421 aa3.88□□□□□ -1.79
USP9X-208ENST00000487625 KRT15P19012 456 aa3.87□□□□□ -1.79
USP9X-208ENST00000487625 ITPKBP27987 946 aa3.87□□□□□ -1.79
USP9X-208ENST00000487625 MRM1Q6IN84 353 aaKnown RBP3.87□□□□□ -1.79
USP9X-208ENST00000487625 HIPK4Q8NE63 616 aa3.87□□□□□ -1.79
USP9X-208ENST00000487625 ALG1Q9BT22 464 aa3.87□□□□□ -1.79
USP9X-208ENST00000487625 WWOXQ9NZC7 414 aa3.87□□□□□ -1.79
USP9X-208ENST00000487625 ASB1Q9Y576 335 aa3.87□□□□□ -1.79
USP9X-208ENST00000487625 NOTCH4Q99466 2003 aa3.87□□□□□ -1.79
USP9X-208ENST00000487625 MANSC4A6NHS7 340 aaPredicted RBP3.86□□□□□ -1.79
USP9X-208ENST00000487625 WNT9AO14904 365 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 HOXA3O43365 443 aaPredicted RBP3.86□□□□□ -1.79
USP9X-208ENST00000487625 EIF2B5Q13144 721 aaKnown RBP3.86□□□□□ -1.79
USP9X-208ENST00000487625 ETFDHQ16134 617 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 MTX3Q5HYI7 312 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 AWAT2Q6E213 333 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 METTL16Q86W50 562 aaKnown RBP3.86□□□□□ -1.79
USP9X-208ENST00000487625 FAM178BQ8IXR5 827 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 SAMD14Q8IZD0 417 aaPredicted RBP3.86□□□□□ -1.79
USP9X-208ENST00000487625 GLB1L3Q8NCI6 653 aaPredicted RBP3.86□□□□□ -1.79
USP9X-208ENST00000487625 PDLIM2Q96JY6 352 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 SPATA32Q96LK8 384 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 ENKD1Q9H0I2 346 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 SLC17A6Q9P2U8 582 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 CBLCQ9ULV8 474 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 MAP3K2Q9Y2U5 619 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 ASXL2Q76L83 1435 aa3.86□□□□□ -1.79
USP9X-208ENST00000487625 A0A1W2PQU0 124 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 ZNF561-AS1K7EIQ3 104 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 DNAJC6O75061 913 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 FDXRP22570 491 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 MIDNQ504T8 468 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 PDCD4Q53EL6 469 aaKnown RBP3.85□□□□□ -1.79
USP9X-208ENST00000487625 TMCO4Q5TGY1 634 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 ZNF654Q8IZM8 581 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 RASGRP4Q8TDF6 673 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 Q96MF0 132 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 SMURF1Q9HCE7 757 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 IL17RBQ9NRM6 502 aa3.85□□□□□ -1.79
USP9X-208ENST00000487625 BLACEA4D250 179 aa3.84□□□□□ -1.79
USP9X-208ENST00000487625 GOLGA6L22H0YM25 854 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms