RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 MYL7Q01449 175 aa24.33■■□□□ 1.49
CLN5-202ENST00000485938 ICA1Q05084 483 aa24.33■■□□□ 1.49
CLN5-202ENST00000485938 HS2ST1Q7LGA3 356 aa24.33■■□□□ 1.49
CLN5-202ENST00000485938 TPH2Q8IWU9 490 aa24.33■■□□□ 1.49
CLN5-202ENST00000485938 FBXO25Q8TCJ0 367 aa24.33■■□□□ 1.49
CLN5-202ENST00000485938 LRRC4BQ9NT99 713 aa24.33■■□□□ 1.49
CLN5-202ENST00000485938 SEPT11Q9NVA2 429 aaKnown RBP24.33■■□□□ 1.49
CLN5-202ENST00000485938 TMOD4Q9NZQ9 345 aa24.33■■□□□ 1.49
CLN5-202ENST00000485938 ZBTB39O15060 712 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 CTNND1O60716 968 aaKnown RBP24.33■■□□□ 1.48
CLN5-202ENST00000485938 ARHGAP44Q17R89 818 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 DENND2CQ68D51 928 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 SLC30A10Q6XR72 485 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 OTOP1Q7RTM1 612 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 FUKQ8N0W3 1084 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 GMCL1Q96IK5 515 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 DYDC2Q96IM9 177 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 ZNF317Q96PQ6 595 aaPredicted RBP24.33■■□□□ 1.48
CLN5-202ENST00000485938 ZC3H12CQ9C0D7 883 aaKnown RBP24.33■■□□□ 1.48
CLN5-202ENST00000485938 GRHL1Q9NZI5 618 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 ALG6Q9Y672 507 aa24.33■■□□□ 1.48
CLN5-202ENST00000485938 KLRG2A4D1S0 409 aaPredicted RBP24.32■■□□□ 1.48
CLN5-202ENST00000485938 DDTLA6NHG4 134 aaPredicted RBP24.32■■□□□ 1.48
CLN5-202ENST00000485938 NDUFB10O96000 172 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 MMP13P45452 471 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 ZNF131P52739 623 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 CACNB3P54284 484 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 DOK7Q18PE1 504 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 PHLDB3Q6NSJ2 640 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 AADACL2Q6P093 401 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 RHOT2Q8IXI1 618 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 GMCL1P1Q8NEA9 526 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 SEL1LQ9UBV2 794 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 RASAL2Q9UJF2 1139 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 FOXN3O00409 490 aaPredicted RBP24.32■■□□□ 1.48
CLN5-202ENST00000485938 PHF2O75151 1096 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 CHN1P15882 459 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 TCP10Q12799 353 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 IKQ13123 557 aaPredicted RBP24.32■■□□□ 1.48
CLN5-202ENST00000485938 CYB5D1Q6P9G0 228 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 C18orf8Q96DM3 657 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 AGPAT1Q99943 283 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 WDR18Q9BV38 432 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 ADAM7Q9H2U9 754 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 KDM4CQ9H3R0 1056 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 HAUS2Q9NVX0 235 aa24.32■■□□□ 1.48
CLN5-202ENST00000485938 RPTORQ8N122 1335 aa24.31■■□□□ 1.48
CLN5-202ENST00000485938 SYNGAP1Q96PV0 1343 aa24.31■■□□□ 1.48
CLN5-202ENST00000485938 CCDC169A6NNP5 214 aa24.31■■□□□ 1.48
CLN5-202ENST00000485938 KRT13P13646 458 aa24.31■■□□□ 1.48
CLN5-202ENST00000485938 C11orf63Q6NUN7 778 aa24.31■■□□□ 1.48
CLN5-202ENST00000485938 LMO3Q8TAP4 145 aa24.31■■□□□ 1.48
CLN5-202ENST00000485938 MAP2K2P36507 400 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 CRKP46108 304 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 FAM178BQ8IXR5 827 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 PRELID2Q8N945 189 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 SLC20A1Q8WUM9 679 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 ATXN2LQ8WWM7 1075 aaKnown RBP24.3■■□□□ 1.48
CLN5-202ENST00000485938 SGSM3Q96HU1 749 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 PI4KBQ9UBF8 816 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 MIF4GDA9UHW6 222 aaKnown RBP24.3■■□□□ 1.48
CLN5-202ENST00000485938 PIK3CDO00329 1044 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 LRRN2O75325 713 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 PSMD10O75832 226 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 MMEP08473 750 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 GHRP10912 638 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 CHRNA3P32297 505 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 TATDN1Q6P1N9 297 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 PARP9Q8IXQ6 854 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 KRT35Q92764 455 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 HVCN1Q96D96 273 aa24.3■■□□□ 1.48
CLN5-202ENST00000485938 CHMP2AO43633 222 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 HSPA6P17066 643 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 RFX1P22670 979 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 BFSP1Q12934 665 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 SLC29A2Q14542 456 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 TCEAL1Q15170 157 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 CHADLQ6NUI6 762 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 TMEM179Q6ZVK1 233 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 STXBP4Q6ZWJ1 553 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 SH3BP5LQ7L8J4 393 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 TAX1BP1Q86VP1 789 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 PCYOX1Q9UHG3 505 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 TRIM37O94972 964 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 RPL21P46778 160 aaKnown RBP24.29■■□□□ 1.48
CLN5-202ENST00000485938 MARCKSL1P49006 195 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 PPP2R5CQ13362 524 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 XRCC4Q13426 336 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 LRCH2Q5VUJ6 765 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 ZDHHC15Q96MV8 337 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 AZI2Q9H6S1 392 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 CNOT7Q9UIV1 285 aaKnown RBP24.29■■□□□ 1.48
CLN5-202ENST00000485938 PCDHA3Q9Y5H8 950 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 UBR3Q6ZT12 1888 aa24.29■■□□□ 1.48
CLN5-202ENST00000485938 TLDC2A0PJX2 215 aa24.28■■□□□ 1.48
CLN5-202ENST00000485938 CTNNA2P26232 953 aa24.28■■□□□ 1.48
CLN5-202ENST00000485938 TTC27Q6P3X3 843 aa24.28■■□□□ 1.48
CLN5-202ENST00000485938 ZDHHC14Q8IZN3 488 aa24.28■■□□□ 1.48
CLN5-202ENST00000485938 UBL4BQ8N7F7 174 aa24.28■■□□□ 1.48
CLN5-202ENST00000485938 CCDC197Q8NCU1 140 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms