RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	COASY	Q13057	564 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	POSTN	Q15063	836 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	AMHR2	Q16671	573 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	HERC4	Q5GLZ8	1057 aa	Predicted RBP	14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	ODR4	Q5SWX8	454 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	CDCA2	Q69YH5	1023 aa	Predicted RBP	14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	ZNF410	Q86VK4	478 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	IFNLR1	Q8IU57	520 aa	Predicted RBP	14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	TMEM161B	Q8NDZ6	487 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	SPIRE2	Q8WWL2	714 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	LINC01599	Q8WXQ3	324 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	IFT74	Q96LB3	600 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	GCOM2	Q9BZD3	368 aa	Predicted RBP	14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	KMT5A	Q9NQR1	393 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	ARHGAP28	Q9P2N2	729 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	LTBP2	Q14767	1821 aa		14.01	□□□□□ -0.17
HDAC7-223	ENST00000485796	INO80B-WBP1	J3KQ70	363 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	RPS6KA5	O75582	802 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	MYB	P10242	640 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	PHKA2	P46019	1235 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	NCKAP1L	P55160	1127 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	FPGS	Q05932	587 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	EHHADH	Q08426	723 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	NFX1	Q12986	1120 aa	Known RBP	14	□□□□□ -0.17
HDAC7-223	ENST00000485796	TFDP1	Q14186	410 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	KMT5B	Q4FZB7	885 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	PLEKHG4	Q58EX7	1191 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	TSHZ1	Q6ZSZ6	1077 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	UNC13D	Q70J99	1090 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	RTN4RL1	Q86UN2	441 aa	Predicted RBP	14	□□□□□ -0.17
HDAC7-223	ENST00000485796	CDR2L	Q86X02	465 aa	Predicted RBP	14	□□□□□ -0.17
HDAC7-223	ENST00000485796	TMEM199	Q8N511	208 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	DEPTOR	Q8TB45	409 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	NTPCR	Q9BSD7	190 aa	Known RBP	14	□□□□□ -0.17
HDAC7-223	ENST00000485796	INO80B	Q9C086	356 aa	Predicted RBP	14	□□□□□ -0.17
HDAC7-223	ENST00000485796	CCDC113	Q9H0I3	377 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	NUP62CL	Q9H1M0	184 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	CLSTN2	Q9H4D0	955 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	IL23A	Q9NPF7	189 aa		14	□□□□□ -0.17
HDAC7-223	ENST00000485796	TRAK2	O60296	914 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	TSPAN1	O60635	241 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	RPN1	P04843	607 aa	Known RBP	13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	RPLP2	P05387	115 aa	Known RBP	13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	MYL1	P05976	194 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	MAPT	P10636	758 aa	Known RBP	13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	HOXA11	P31270	313 aa	Predicted RBP	13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	POU5F1B	Q06416	359 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	KCNA1	Q09470	495 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	STK4	Q13043	487 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	DMP1	Q13316	513 aa	Predicted RBP	13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	TMEM240	Q5SV17	173 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	NT5DC1	Q5TFE4	455 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	ZNF365	Q70YC5	407 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	ZNF720	Q7Z2F6	126 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	SRGAP1	Q7Z6B7	1085 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	CCDC65	Q8IXS2	484 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	CPB2	Q96IY4	423 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	STRA6	Q9BX79	667 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	FZD8	Q9H461	694 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	PCDHA5	Q9Y5H7	936 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	TANC1	Q9C0D5	1861 aa		13.99	□□□□□ -0.17
HDAC7-223	ENST00000485796	PVALEF	A0A1B0GWK0	134 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	DENND3	A2RUS2	1198 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796		K7ENM7	598 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	PRPF6	O94906	941 aa	Known RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	SMC2	O95347	1197 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	PRKCB	P05771	671 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	GAP43	P17677	238 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	RFC2	P35250	354 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	HOXD13	P35453	343 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	CDC42EP1	Q00587	391 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	PAK2	Q13177	524 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	PPIG	Q13427	754 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	DSC3	Q14574	896 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	PPP2R5A	Q15172	486 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	KLHL40	Q2TBA0	621 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	C9orf50	Q5SZB4	431 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	ISM2	Q6H9L7	571 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	CAVIN1	Q6NZI2	390 aa	Known RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	CATSPER4	Q7RTX7	472 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	HAUS6	Q7Z4H7	955 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	FAM178B	Q8IXR5	827 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	SMARCE1	Q969G3	411 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	CCDC47	Q96A33	483 aa	Known RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	GDF15	Q99988	308 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	NFKBIZ	Q9BYH8	718 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	IFIH1	Q9BYX4	1025 aa	Known RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	MRPL44	Q9H9J2	332 aa	Known RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	C17orf75	Q9HAS0	396 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	SLC39A2	Q9NP94	309 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	LARS	Q9P2J5	1176 aa	Known RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	SQOR	Q9Y6N5	450 aa		13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	RANBP2	P49792	3224 aa	Known RBP	13.98	□□□□□ -0.17
HDAC7-223	ENST00000485796	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.97	□□□□□ -0.17
HDAC7-223	ENST00000485796	TISP43	B9A030	160 aa		13.97	□□□□□ -0.17

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