RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 TMPRSS7Q7RTY8 843 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 CMTR1Q8N1G2 835 aaKnown RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 PDCD7Q8N8D1 485 aaKnown RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 HDAC7Q8WUI4 952 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 BAP1Q92560 729 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 MKL1Q969V6 931 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 ZNF707Q96C28 371 aaPredicted RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 CASD1Q96PB1 797 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 PSMG3-AS1Q96PY0 264 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 IWS1Q96ST2 819 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 DNAJC2Q99543 621 aaKnown RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 KXD1Q9BQD3 176 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 PI4K2AQ9BTU6 479 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 NUSAP1Q9BXS6 441 aaKnown RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 USP44Q9H0E7 712 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 DUSP15Q9H1R2 295 aaPredicted RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 POLMQ9NP87 494 aaPredicted RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 PIH1D3Q9NQM4 214 aaKnown RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 RGS18Q9NS28 235 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 ZDHHC7Q9NXF8 308 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 HSPBP1Q9NZL4 362 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 EVLQ9UI08 416 aaPredicted RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 PA2G4Q9UQ80 394 aaKnown RBP4.36□□□□□ -1.71
CAPN8-210ENST00000484873 PCDHB9Q9Y5E1 797 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 CCDC171Q6TFL3 1326 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 IGSF9BQ9UPX0 1349 aa4.36□□□□□ -1.71
CAPN8-210ENST00000484873 TSC2P49815 1807 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 TTLL13PA6NNM8 815 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 C9IYK1 514 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 NOP56O00567 594 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 MEFVO15553 781 aaPredicted RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 B4GALT3O60512 393 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 VAMP4O75379 141 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ECI2O75521 394 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 RFPL2O75678 378 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 EIF3JO75822 258 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 TTLL1O95922 423 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 GLUD1P00367 558 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ADH1AP07327 375 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 CNPP09543 421 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 RPL17P18621 184 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ZAP70P43403 619 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 FXR2P51116 673 aaKnown RBP eCLIP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ATXN3P54252 364 aaPredicted RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 BCAR1P56945 870 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 SNAP25P60880 206 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 NFX1Q12986 1120 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 PKDCCQ504Y2 493 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 DGKKQ5KSL6 1271 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 C12orf60Q5U649 245 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ZNF746Q6NUN9 644 aaPredicted RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 AGMOQ6ZNB7 445 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ATG14Q6ZNE5 492 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 CYP2U1Q7Z449 544 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 C11orf74Q86VG3 221 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ZNF280BQ86YH2 543 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 GALNT15Q8N3T1 639 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 PNPLA1Q8N8W4 532 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 NSUN6Q8TEA1 469 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 SDR42E1Q8WUS8 393 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 DNAJB3Q8WWF6 145 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 FGF13Q92913 245 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 IRF7Q92985 503 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 GLMNQ92990 594 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 MSANTD3Q96H12 275 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 GMCL1Q96IK5 515 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ZNF512BQ96KM6 892 aaPredicted RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 CALR3Q96L12 384 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 ADAM2Q99965 735 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 MRPL9Q9BYD2 267 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 PRKD2Q9BZL6 878 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 NT5C3AQ9H0P0 336 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 TMX1Q9H3N1 280 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 PLEKHA4Q9H4M7 779 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 MLXIPQ9HAP2 919 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 GDPD2Q9HCC8 539 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 NPDC1Q9NQX5 325 aaPredicted RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 MRPL17Q9NRX2 175 aaKnown RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 SMC4Q9NTJ3 1288 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 KIAA1522Q9P206 1035 aaPredicted RBP4.35□□□□□ -1.71
CAPN8-210ENST00000484873 TUBE1Q9UJT0 475 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 HDAC5Q9UQL6 1122 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 MAN2B2Q9Y2E5 1009 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 TRPV2Q9Y5S1 764 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 PIAS3Q9Y6X2 628 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 COL12A1Q99715 3063 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 COL6A6A6NMZ7 2263 aa4.35□□□□□ -1.71
CAPN8-210ENST00000484873 LOXHD1Q8IVV2 1947 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 DOPEY2Q9Y3R5 2298 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 PATE3B3GLJ2 98 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 NT5C1B-RDH14C9J2C7 533 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 MGEA5O60502 916 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 OPHN1O60890 802 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 GGPS1O95749 300 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 C1RP00736 705 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 MYF5P13349 255 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 HLA-EP13747 358 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 ENGP17813 658 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 TNFRSF8P28908 595 aa4.34□□□□□ -1.71
CAPN8-210ENST00000484873 GBP1P32455 592 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms